Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0548 |
Symbol | |
ID | 3970789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 595108 |
End bp | 596205 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637923664 |
Product | CarD family transcriptional regulator |
Protein accession | YP_530442 |
Protein GI | 90422072 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.300109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.699777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAA CCCGGTCACG ACCGCTTTTG TGCATCAGGA GTCCTGCGCA AACATCGAAC AGGGGCGTGG CCGTCCACGC GCAGGCTGTG TCACAGAAAA CGCGTAAAAA GAGTGTTTCC AAGGGTGTGA AAAAAGCCGC TGCGGCCAGC CGTAGTGCGA CGAAGACACG TTCCCGGACA GCCGCCCGGG CCGCCGCCAA GGATTCCAAG AAGGCCTCCG CCAAGGCTTC CAAGTCGTCG AATTCGTCGT CGAGTTCTTC TTCGTCGTCG AACTCAAAGG CGTCGGCAGC CAAGTCCTCC AAAAACAAAA GAAGTGCAAT GCCAAAAACG ACTGCGAAAA CGACCGTGAA GCCGACAGCC GCCGCGCCGA AAGCCGCCCC GAAAGCGGCC GCGAAGCCGG CGGTCGCCAA GCCGCCCGTC GTCGCCAGCA AGCAGCCGGT CGCGGCCGCT GCAAAGCCTG CGGCCAAGCC CGCGGCTGCG GCGCCGCGCG TCGAAGAGGC GAAGAAGCCT TTGACGCAGC GCCAGGGCTT CAAGACCAAC GAATTCGTGG TCTATCCGGC GCACGGCGTC GGCCAGATTC TGGCGATCGA AGAGCAGGAA ATCGCAGGCG CCAAGCTTGA GCTGTTCGTG ATCAACTTCA TGAAGGACAA GATGACGTTG CGGGTGCCGA CCGCCAAAGT GGCGAATGTC GGCATGCGCA AGTTGTCGGA GCCGGCTTTG GTGAAGCGGG CGCTGGAGAC GCTGAAAGGC CGCGCCCGGG TCAAGCGAAC GATGTGGTCG CGCCGCGCCC AGGAATACGA AGCCAAGATC AATTCCGGCG ATATCGTTGC GATCGCCGAG GTGGTGCGCG ATCTGTATCG GTCGGATTCG CAGCCCGAGC AGTCCTACAG TGAACGCCAG CTCTATGAAG CGGCGCTGGA TCGGCTCTCG CGGGAAATCG CGGTGGTGCA GCACGTCACC GAAACCGAAG CGGTCAAGGA AGTCGAAGGC CAGCTCGCCA AGAGCCCGCG CCGCGGCGCC AAGACCGAGG TCGAAGCCGA CGCGGATGCC GAAGCTGAGA CCGATGGCGA CGATGTTGCC GCGGACGAGG CAGCGTAA
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Protein sequence | MSRTRSRPLL CIRSPAQTSN RGVAVHAQAV SQKTRKKSVS KGVKKAAAAS RSATKTRSRT AARAAAKDSK KASAKASKSS NSSSSSSSSS NSKASAAKSS KNKRSAMPKT TAKTTVKPTA AAPKAAPKAA AKPAVAKPPV VASKQPVAAA AKPAAKPAAA APRVEEAKKP LTQRQGFKTN EFVVYPAHGV GQILAIEEQE IAGAKLELFV INFMKDKMTL RVPTAKVANV GMRKLSEPAL VKRALETLKG RARVKRTMWS RRAQEYEAKI NSGDIVAIAE VVRDLYRSDS QPEQSYSERQ LYEAALDRLS REIAVVQHVT ETEAVKEVEG QLAKSPRRGA KTEVEADADA EAETDGDDVA ADEAA
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