| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0548 |
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| Symbol | |
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| ID | 3970789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 595108 |
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| End bp | 596205 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923664 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_530442 |
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| Protein GI | 90422072 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.300109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.699777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAA CCCGGTCACG ACCGCTTTTG TGCATCAGGA GTCCTGCGCA AACATCGAAC
AGGGGCGTGG CCGTCCACGC GCAGGCTGTG TCACAGAAAA CGCGTAAAAA GAGTGTTTCC
AAGGGTGTGA AAAAAGCCGC TGCGGCCAGC CGTAGTGCGA CGAAGACACG TTCCCGGACA
GCCGCCCGGG CCGCCGCCAA GGATTCCAAG AAGGCCTCCG CCAAGGCTTC CAAGTCGTCG
AATTCGTCGT CGAGTTCTTC TTCGTCGTCG AACTCAAAGG CGTCGGCAGC CAAGTCCTCC
AAAAACAAAA GAAGTGCAAT GCCAAAAACG ACTGCGAAAA CGACCGTGAA GCCGACAGCC
GCCGCGCCGA AAGCCGCCCC GAAAGCGGCC GCGAAGCCGG CGGTCGCCAA GCCGCCCGTC
GTCGCCAGCA AGCAGCCGGT CGCGGCCGCT GCAAAGCCTG CGGCCAAGCC CGCGGCTGCG
GCGCCGCGCG TCGAAGAGGC GAAGAAGCCT TTGACGCAGC GCCAGGGCTT CAAGACCAAC
GAATTCGTGG TCTATCCGGC GCACGGCGTC GGCCAGATTC TGGCGATCGA AGAGCAGGAA
ATCGCAGGCG CCAAGCTTGA GCTGTTCGTG ATCAACTTCA TGAAGGACAA GATGACGTTG
CGGGTGCCGA CCGCCAAAGT GGCGAATGTC GGCATGCGCA AGTTGTCGGA GCCGGCTTTG
GTGAAGCGGG CGCTGGAGAC GCTGAAAGGC CGCGCCCGGG TCAAGCGAAC GATGTGGTCG
CGCCGCGCCC AGGAATACGA AGCCAAGATC AATTCCGGCG ATATCGTTGC GATCGCCGAG
GTGGTGCGCG ATCTGTATCG GTCGGATTCG CAGCCCGAGC AGTCCTACAG TGAACGCCAG
CTCTATGAAG CGGCGCTGGA TCGGCTCTCG CGGGAAATCG CGGTGGTGCA GCACGTCACC
GAAACCGAAG CGGTCAAGGA AGTCGAAGGC CAGCTCGCCA AGAGCCCGCG CCGCGGCGCC
AAGACCGAGG TCGAAGCCGA CGCGGATGCC GAAGCTGAGA CCGATGGCGA CGATGTTGCC
GCGGACGAGG CAGCGTAA
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| Protein sequence | MSRTRSRPLL CIRSPAQTSN RGVAVHAQAV SQKTRKKSVS KGVKKAAAAS RSATKTRSRT
AARAAAKDSK KASAKASKSS NSSSSSSSSS NSKASAAKSS KNKRSAMPKT TAKTTVKPTA
AAPKAAPKAA AKPAVAKPPV VASKQPVAAA AKPAAKPAAA APRVEEAKKP LTQRQGFKTN
EFVVYPAHGV GQILAIEEQE IAGAKLELFV INFMKDKMTL RVPTAKVANV GMRKLSEPAL
VKRALETLKG RARVKRTMWS RRAQEYEAKI NSGDIVAIAE VVRDLYRSDS QPEQSYSERQ
LYEAALDRLS REIAVVQHVT ETEAVKEVEG QLAKSPRRGA KTEVEADADA EAETDGDDVA
ADEAA
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