| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0545 |
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| Symbol | |
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| ID | 3970786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 590709 |
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| End bp | 594218 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923661 |
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| Product | helicase-like |
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| Protein accession | YP_530439 |
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| Protein GI | 90422069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.755336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTT CAACTTCAGG ATCGGCCTCT GCGAACGACC GCGCCCCCGG CGCGGGCGTC
ACCGCCGTGC TCGGTCCCAC CAACACCGGC AAGACCCATC TGGCGATCGA GCGGATGCTG
GCGCATTCCT CCGGCGTGAT CGGGTTGCCG CTGCGACTGT TGGCGCGCGA GGTCTACAAC
AAGATCGTCG ACCGGGCGGG GCCGGACGCG GTGGCGCTGA TCACCGGCGA GGAGAAGATC
AAGCCGCCGA AGCCGCGCTA TTGGGTCTCC ACCGTCGAGG CGATGCCGCG CGATCTCGAC
GTGTCGTTTC TGGCGGTCGA CGAGATCCAG ATCGCCGCCG ATCTGGAGCG CGGCCATGTC
TTCACCGACC GCATCCTGCA CCGGCGGGGC CGCGATGAAA CGCTGCTGCT GGGGGCTGCG
ACGATGCGGC CGATCATCGA GCGGTTGCTG CCGGGCGCCA GCATCGTTAC CCGGCCGCGG
CTGTCGCAGC TGGAGTTCGC CGGCGACCGC AAGATCACCC GGCAACCGCG GCGCACCGCG
ATCGTGGCGT TCTCCGCCGA CGAGGTCTAC GCCATCGCCG AGTTGATCCG CCGCCAGCAT
GGCGGTGCTG CGGTGGTGCT GGGATCGCTC AGCCCGCGCA CCCGCAACGC TCAGGTGGCG
ATGTATCAGT CGGGCGATGT CGACTATCTG GTGGCGACCG ACGCGGTCGG CATGGGGCTC
AACCTCGACG TCGACCACGT CGCCTTCGCG TCCGACCGCA AATATGATGG TTATCAATTC
CGCCGGCTGA ATCCGTCGGA ATTCGCCCAG ATCGCCGGCC GCGCCGGCCG CGCGACCCGC
AATGGCACTT TTGGCACCAC AGGCCGCTGT GCGCCGTTTG AGCCGGAATT GGTCAACGCG
CTGCAGAATC ATACCTTCGA CAGCGTGAAA ACGCTGCAAT GGCGCAATTC AAGGCTGGAT
TTTTCCTCGC TCGGCGCGCT GCAGGTGTCG CTGTCGCTGA CCCCAAGCCA TGAGGCGCTG
ACCCGCGCCC CGATCGCCGA AGACCTGCGG GTGCTCGATC ATGCCGCGCG AGACGGCGAA
GTTCGCGACA TCGCCCATGG CGCTGCGGCC GTCGAACGTC TATGGGACGC CTGCCAGATT
CCGGATTATC GGAAGATCGC GCCGGCGGCG CACGCCGAGC TCGTGACGAC GCTGTTCGGC
TATTTGATGC GGAAAGGCAG AATTCCGGAT GCATGGTTTG CGACCCAGAT CGCCCAGGCG
GATCGAACCG ATGGCGACAT CGACACGTTG TCCGGACGGA TCGCGCAGAT CCGAACCTGG
ACCTTCGTGG CCAATCGTCC GGACTGGCTG GCAGACCCCG AGCACTGGCA GGGCATCTCG
CGAGACCTCG AAAATAAATT GTCCGATGCG CTCCACGAAC GCCTAACAGA ACGTTTCGTT
GATCGCCGTA CCAGTGTATT GATGCGCCGC CTGCGGGAAA ACACGATGTT GAACACCGAA
ATTGGAAAGA CCGGCGAAGT GATCGTAGAG GGCCATGTGA TTGGCCGTCT CGATGGGTTC
ACGTTTGCGC CGGATGCTGC CGAAGCAGGC TCCGACGCCA AGGCCTTGCA GGCCGCGGCG
CTGAAGGCGC TGGCCGGCGA GATCGAAAGC CGGGCCGAAA AGCTGGCGGC TGCGCCCGAC
GATCAGTTCG TGCTGGCGTC CGACGGCACC GTCCGTTGGA CCGGCGACGC CGTCGCCAAG
CTGGTCGCGG CCGATGACGC GCTGCATCCG CGGCTGCGCA TCGTCGCCGA CGACCGGCTG
GCGGGGGCTG CGCGCGAAGC GGTGCAGACC CGTCTCGAAC TGTGGCTGAA GACCCATGTC
GAGAAACTGC TCGGACCGCT GTTCGACCTC GCCAAGGCCG AGGACGTCAC CGGGATCGCC
CGCGGTATCG CGTTTCAGCT GATCGAAGCG CTCGGCGTGC TGGAGCGCTC CAAGATCGCC
GCCGAGATGA AAGACCTCGA CCAGGCCTCG CGCGCGGTGC TGCGCAAATA CGGCGTGCGG
TTCGGCGCCT ACCACATCTA TCTGCCCTCG CTGCTGAAGC CCGCGGCGCG CTCGTTGGCT
TCGCTGTTAT GGGTTCAGAA GCGCGATCAG GTCGATTTGT CGGCGCTGTC CGGCGCCCAG
CATCTGGCCG GCTCCGGCCG CACCTCGTTT CCGGTCGACA AGCAGCTCGA CCGCGACGCC
TATCGCACGC TGGGCTACCG GCAATGCGGC GAGCGCGCGG TGCGCGTCGA TATTCTGGAG
CGGCTCGCCG ACCTGATTCG GCCGGCGCTG TCGTGGCGCG AGACCTCGCC CGGCGAAAAG
CCCGCCGGGG CGTTCGACGG TCGCGGCTTC ATCGTGACGC AGGCGATGAC CTCGCTGACC
GGCTCGGCCG GCGAAGATTT CGCCTCGATC CTGCGCGCGC TCGGCTATCG GATGGAAAAG
AAGCCGCCGT TGCCGCCGGC ACCGCCGAAG CCCGTCGTGG TGGAGACGGC GCCTGTTGAA
GCAACAGACC CCGAGGCGAA TCCAACAGAA ACGACGGTTG CCGATCAAGC TGCGCCTGAC
GCGACGGTCG CCGAGACCAT CGTGTCGGAG ACCTCGGCAA CGGACGCCGC GATCGCCGAC
CCGGAGCACG CCGCGGCCGC AGATATCGGT GCGGCTGTGC AGGAGGCCGT CACCGAGGCG
CCGCCGCTCG ATCCCGCGCT CACCGAATCG GCCGGCGAAG TGCCGGCTGT GGCCGAACCC
ACAGCTGCGC CGCAGATCGC GGCCGAGGTT GTCAGCCCGG ACGCCGAAGC TCCGGCAGAG
AGCGCCAGCG CCGAAACGGT CAGCGAAGCC GCCGACACTC CGACGTCCGA TGCCCCTGGC
AGCGAAGCCA TCGCCACCGA AGCCGTTGCC GTTCTGACGA CGGCCGAGGC CGACCCGGCT
GTGGTGGCGG GCTCCGATCC CGCATTGGCC GCCGACGCCG CGGTCGCGGT GCCGGAATTG
GTCGAGGTCT GGCGGCCCGG TGGCCGCGCC GACGATCACC GGCCGCGGCA CGATCGCAAC
CGCTATCGCA ATCCTGATCG CGCGGCGCAG GCCGGCCAGC CGGCCAGCGC CGGCGAAGCC
GGTGAGGCCG AGCAAGGCAA GGGCGATCGT CCGAACCGCG GACGACGCGA CCGCAAGCCG
GAGTTCCGCC GGCCCCGCAC CGACGCGCCG GTCGCGGCCG CTGCGGATGC GCCTGCGGCA
GAGGGCACGC CCGATGCGCG GCCGGCGCAA GCTCCGCGCC CGCCACGGGA CCGCGAGCGC
TTCCAGGGCA AAGGGGGCCG CGGCAAGGAC AAGTTCCAGG GCGGCAAGGG CGGCCGGGAA
GGTCGCGAAG GACGCGACTC CGGCGACCGC GCGCCGCGGG TATTCTCCTC CAGCGCGCCG
CGCGAACGCG AGCGGGTCGC CGACCCGAAT TCGCCGTTCG CCAAACTCGC CGCGCTGAAA
GAGCAGCTCA CCGCCAACCG CAAGGATTAA
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| Protein sequence | MAFSTSGSAS ANDRAPGAGV TAVLGPTNTG KTHLAIERML AHSSGVIGLP LRLLAREVYN
KIVDRAGPDA VALITGEEKI KPPKPRYWVS TVEAMPRDLD VSFLAVDEIQ IAADLERGHV
FTDRILHRRG RDETLLLGAA TMRPIIERLL PGASIVTRPR LSQLEFAGDR KITRQPRRTA
IVAFSADEVY AIAELIRRQH GGAAVVLGSL SPRTRNAQVA MYQSGDVDYL VATDAVGMGL
NLDVDHVAFA SDRKYDGYQF RRLNPSEFAQ IAGRAGRATR NGTFGTTGRC APFEPELVNA
LQNHTFDSVK TLQWRNSRLD FSSLGALQVS LSLTPSHEAL TRAPIAEDLR VLDHAARDGE
VRDIAHGAAA VERLWDACQI PDYRKIAPAA HAELVTTLFG YLMRKGRIPD AWFATQIAQA
DRTDGDIDTL SGRIAQIRTW TFVANRPDWL ADPEHWQGIS RDLENKLSDA LHERLTERFV
DRRTSVLMRR LRENTMLNTE IGKTGEVIVE GHVIGRLDGF TFAPDAAEAG SDAKALQAAA
LKALAGEIES RAEKLAAAPD DQFVLASDGT VRWTGDAVAK LVAADDALHP RLRIVADDRL
AGAAREAVQT RLELWLKTHV EKLLGPLFDL AKAEDVTGIA RGIAFQLIEA LGVLERSKIA
AEMKDLDQAS RAVLRKYGVR FGAYHIYLPS LLKPAARSLA SLLWVQKRDQ VDLSALSGAQ
HLAGSGRTSF PVDKQLDRDA YRTLGYRQCG ERAVRVDILE RLADLIRPAL SWRETSPGEK
PAGAFDGRGF IVTQAMTSLT GSAGEDFASI LRALGYRMEK KPPLPPAPPK PVVVETAPVE
ATDPEANPTE TTVADQAAPD ATVAETIVSE TSATDAAIAD PEHAAAADIG AAVQEAVTEA
PPLDPALTES AGEVPAVAEP TAAPQIAAEV VSPDAEAPAE SASAETVSEA ADTPTSDAPG
SEAIATEAVA VLTTAEADPA VVAGSDPALA ADAAVAVPEL VEVWRPGGRA DDHRPRHDRN
RYRNPDRAAQ AGQPASAGEA GEAEQGKGDR PNRGRRDRKP EFRRPRTDAP VAAAADAPAA
EGTPDARPAQ APRPPRDRER FQGKGGRGKD KFQGGKGGRE GREGRDSGDR APRVFSSSAP
RERERVADPN SPFAKLAALK EQLTANRKD
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