Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0542 |
Symbol | |
ID | 3970783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 585318 |
End bp | 588470 |
Gene Length | 3153 bp |
Protein Length | 1050 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923658 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_530436 |
Protein GI | 90422066 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.757487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.763027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGT CCACCCGCAT GGCATTGGCG ATGGTTGCGC TGGTGTCGTT CACGACCATC GCTCTGGGCT TGCTGACTTA TCACAGCGTC ATGACGCTGA TCCTGCCGCG CGCGCTCGAC CGGCTGCAAA CCCACGCCCG CGTCACCGCC ATGTTGCTGG ACGCCTCGTT GCGCAGCGCC CGCACCGACG CTGCTATCGC GCAAACCTCC GGGGCGGCGA TGATGATGCA CCTGCGCAAG CAGTTCGGTG CCGCCCCGGA CAAAATCGAA AGCGAATGGA AGGAAGCCAC CGCGGAGCGC TTCGCGGCGG AGATGTCCGG CAAGCCCGCC TACGCGCAGA TGCGCGTGAT CGGGGTCGCC GACGGCGGCA TGGAAATCGT CCGTGTCGAC CGCACCGGTC CTAACGGCGC GATCCGCATC GTCCCGGACG ATGAGTTGAC CCGTCGCGGC GACCGGGACT ACTTCCTGCA AGGCATCAAA ATCGGGCCGA ACCAGATTCA CATCTCGCGC GTCGAACTCA ACAAGAAGGC CACCGGCCTG GAACTTCCTC TGGTCCCGAC GCTGCGCACG GTCGCGCCGA TCCATCACCC CGATGGCGCG CTGTTCGGCG TCATCGTCAT CAACGTCGAT CTGCGTCCGG CGATCGCGGA GATCCGCTCC AGCGGCAAAC CCAGCGCGCT GGTCTACATG GTCAACGACG CCGGCGATTA CTTGGTGAAT CCGGATCCCG CGAAGGAGTT TGGCTTCGAT CTCGGCAGGC GTTTTCGGAT CGGCGACGAT TTCCCGGAAT TCGCCTCGGC GCTGCAACAA ACCGACGCTC GGCCGCGGGT GATGCAAGAC CGCGACGGTC AGCGCTTCGG CGTTGGCTGG CAATGGGTGC GGCTTGCCGG CGGCCCGCGA GTTGCCGTGA TCGAGGCCTT CCCCTACGGC ACGCTGATGA GCGTGCAGAC CGCCGTCAGC AATTCGACGC TGATCGGCGG CGCCGCCGCG GTTCTTTGCG CCATCCTGAT GGCGGTGGGG GTCGCGCGTT CGCTCACCAA GCCGCTGGTG CAGATCACCA AGGCCGTCGA GGGGTTTTCC CGCGGCGAGA TGATTGCGAT CTCGGCGACC GGCGGCAACG AGATCGACGT ACTGGCCGGA GCCTTCATCC GGATGACCGC GGAGTCGCAG CGCAAGACCG CTGAACTCAA CGAGGAGATC GCCGAACGCA GCCGGATCGC CGAGGTGTTG AACAACACGC TCAACAACAT GGTCGATCCG GTGCTGATCG CCGGCGCCGA CGGTCACGTC ATTCTCACCA ACTTCGCCGC GCGCAAGCTG TTCGGCAATC CGACCGGGGT CGGCAATATG AACGCGGTGC GGACCTTCGA GCGATTCTAT TCCGATGGCG TAACGCCGCT GCCGCCGCAG ATGTCGCCGC TGGTGCGGGC GTTCCGCGGC GAGATCGTCG AGAACTTCGA ATTCGTTGCG CGGCCGTTGG CGTCCGCGCA CAAATCATAT TTGGTCGCCA ACGGCCGCCC GATCCGCAGC GAGGCCGGGA TCCTGCAAGG CGCGGTGATG GTCTATCACG ACGTCACTCA GACCAAGAAG GCGCAGGACG AATTGCGCGA AAGCGAGCGG ATGGCGCGCG CGATCATCGA CACCGCACTC GACGCTTTCG TGCAGATCGA TCCCAGCGGG GCGATCACCG AATGGAGCCC GCATGCCGAA ACGCTGTTCG GCTGGTCGCG CAACGAGGCG CTGGGAGAGA ACATCGGCGT GCTGATCTTC TCACCCGATC AGACGAGCGA GACCAAGACG AACTACCGCA AGTTCATCGA CTCGGTCGAT CACGGCGGCA CCGGCTATCG GATCGAGACC GAGGCGACCC GCCGCGACGG CACCACGATC CAGATCGAGG TGGCGCTGAC CGCGCTGGTG CGCAACGGCG GCCATGTGAC CAACGCCTTC ATGCGCGACC TCACGGAAAA GACCATCGCC GAGCAGCAAT TGCGGCAAGC GCAGAAGATG GAATCGATCG GTCAATTGAC CGGCGGCATC GCTCACGATT TCAACAACAT GCTGACCGTG ATCACCGGCA CCATCGACAT CCTGGGCGCC GCGGTCGCCG ACCGTCCGGA ATGCGCGACG ATCACCAAGC TGATCTCCGA CGCCGCCGAC CGCGGCGCGG AACTGACGCG CCATTTGCTG GCGTTCGCGC GCAAGCAGCC GCTGCAACCC TGCGAGACCG ACCCCAACAC GCTGCTCAGC GACCTGCAGA ACCTGTTGCG GCCGACGCTC GGCGAACAGA TCGAAATCTG CGAGGTGCTG CAGGACGGGG TGTGGCCGAT CTTCGTCGAT CGCGGCCAGC TCGACGCCGC GCTGGTCAAT CTTGCGGTCA ACGCCCGCGA CGCCATGCCG GACGGCGGCA CGCTGACGCT GGAGACCACC AATGTGGTGC TCGACGAGGA TTATGTTCGG CGCTACGCCG AAGGCGAGCC GGGACCCTAC GTGATGATCA CGATCAGCGA TTCCGGCTGC GGAATTCCGG AGGCGATCCG CGGCAGGGTG TTCGACCCGT TCTTCACCAC CAAAGAAGTC GGCAAGGGCA CCGGGCTCGG GCTCAGCATG GTGTACGGCT TCATCAAGCA ATCCGGCGGC CATATCACGC TGTACAGCGA AGTCGGGCAC GGCACCACGT TCCGCATCTA CCTGCCACGC GCCAAGACCG AGCCGCAGTT GGTGGCGCCG TCGGTCAGCG AGGCGGTGGA GGTCGGCGGC AACGAAACCA TCCTGATCGT CGAAGACGAC GCCATGGTTC GCAACTACGT CACCGCCCAG CTCAAGGGGC TCGGCTACAC CACGCTGGCC GCACCCAACG CCGCGGCGGC GCTGGCGCTC AGCGCCGAGG GCGCGTCGTT CGACCTCTTG TTCACCGATA TCGTGATGCC GGGCAAGATG AACGGGGTGC AGCTCGCCGC CGAGATGGCG AAGCAGCATC CCTCGCTCAA GGTGTTGTAC ACCTCCGGCT ATTCGGAGAA TGCGGTGATC CACAACAACC GGCTCGATCC CGATATCCTG CTGCTCACCA AGCCGTATCG CCGCACCGCG TTGGCCCGCA TGGTCAGATT GGCGCTGAGC GCGGCGACCG AACCGGAACG CCGACAGGCC TAG
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Protein sequence | MKLSTRMALA MVALVSFTTI ALGLLTYHSV MTLILPRALD RLQTHARVTA MLLDASLRSA RTDAAIAQTS GAAMMMHLRK QFGAAPDKIE SEWKEATAER FAAEMSGKPA YAQMRVIGVA DGGMEIVRVD RTGPNGAIRI VPDDELTRRG DRDYFLQGIK IGPNQIHISR VELNKKATGL ELPLVPTLRT VAPIHHPDGA LFGVIVINVD LRPAIAEIRS SGKPSALVYM VNDAGDYLVN PDPAKEFGFD LGRRFRIGDD FPEFASALQQ TDARPRVMQD RDGQRFGVGW QWVRLAGGPR VAVIEAFPYG TLMSVQTAVS NSTLIGGAAA VLCAILMAVG VARSLTKPLV QITKAVEGFS RGEMIAISAT GGNEIDVLAG AFIRMTAESQ RKTAELNEEI AERSRIAEVL NNTLNNMVDP VLIAGADGHV ILTNFAARKL FGNPTGVGNM NAVRTFERFY SDGVTPLPPQ MSPLVRAFRG EIVENFEFVA RPLASAHKSY LVANGRPIRS EAGILQGAVM VYHDVTQTKK AQDELRESER MARAIIDTAL DAFVQIDPSG AITEWSPHAE TLFGWSRNEA LGENIGVLIF SPDQTSETKT NYRKFIDSVD HGGTGYRIET EATRRDGTTI QIEVALTALV RNGGHVTNAF MRDLTEKTIA EQQLRQAQKM ESIGQLTGGI AHDFNNMLTV ITGTIDILGA AVADRPECAT ITKLISDAAD RGAELTRHLL AFARKQPLQP CETDPNTLLS DLQNLLRPTL GEQIEICEVL QDGVWPIFVD RGQLDAALVN LAVNARDAMP DGGTLTLETT NVVLDEDYVR RYAEGEPGPY VMITISDSGC GIPEAIRGRV FDPFFTTKEV GKGTGLGLSM VYGFIKQSGG HITLYSEVGH GTTFRIYLPR AKTEPQLVAP SVSEAVEVGG NETILIVEDD AMVRNYVTAQ LKGLGYTTLA APNAAAALAL SAEGASFDLL FTDIVMPGKM NGVQLAAEMA KQHPSLKVLY TSGYSENAVI HNNRLDPDIL LLTKPYRRTA LARMVRLALS AATEPERRQA
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