Gene RPC_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0541 
Symbol 
ID3970782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp584285 
End bp585283 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637923657 
Producthypothetical protein 
Protein accessionYP_530435 
Protein GI90422065 
COG category[S] Function unknown 
COG ID[COG4246] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.682132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.522386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTGGG CGCAGCCCGC AACAACCGCC TCCCCCAAGC AACGTGTCGC TACTGACTAT 
GCCGCCGACG CGCCGGTCGC GATCGAGGTC AACGCCCGTC CGCTGAGATC ATTCGATACC
CGCGATCCCT CGCACGTCCG CTTCGGCGCG TTGCAGTTTC GCAGCGGGCT GATCCTCACC
TCGCCGTTTC GCGGCTTCGG CGGACTGTCG GCGCTGCGGC TCGACGACCG CGGCGAACGC
TTCGTCGCGA TCAGCGACAA GGCGACCTGG TTCACCGGCC GCATCGTCTA TCGCGGCCGC
GACATGGTGG GGCTCGCCGA TGTCGAGGCC GCACCGATGC TCGGCGCCGA CGGCCGGCCG
ATCACCGCGC GCGGCTGGTA CGACAGCGAG TCGCTGGCGC TTGATAACGG CATCGCCTAT
GTCGGCCTGG AGCGGGTGCA GCAGATCCTG AAATTCGATT TCGGCCGCGA CGGCATCCGC
GCCAGAGGCG AGGTGCTGGC GACGCCGCCG GCACTGCGCA AGCTGCCGAG CAACAAGGGT
CTCGAGGCGC TGCTGCTGGT GCCGAAAGGC CTGCCGATGG CGGGGACCTT GATCGCGCTT
TCGGAACGCG GTCTCGACGC CGACGGCAAT ATCGTCGGCT TTCTGATCGG CGGCAAAACC
CCCGGACCAT TCGCCGTGCG CCGCCGCGAC GATTTCGACA TCAGCGACGC CTGCCTGCTG
CCGGACGGGG AATTGCTGGT GTTGGAGCGC AAGTTTTCGC TGCTGACCGG TGCCGGCATC
AGGATTAGGC GGATCGCACT GCGCTCGCTG GCGCCCGGCG CCGTGATCGA CGGTCCGTCG
ATCTTCGACG CCGATCTCGG CGACGAGATC GACAACATGG AAGGGCTCGA CGTGCATCGC
GGCGCCGCCG GCGATCTGGT CGTCACCCTG GTCTCGGACG ACAATTTCTC GATGATCCAA
CGCACCCTGC TGCTGCAGTT CACGCTGCTC GAAGAGTAA
 
Protein sequence
MAWAQPATTA SPKQRVATDY AADAPVAIEV NARPLRSFDT RDPSHVRFGA LQFRSGLILT 
SPFRGFGGLS ALRLDDRGER FVAISDKATW FTGRIVYRGR DMVGLADVEA APMLGADGRP
ITARGWYDSE SLALDNGIAY VGLERVQQIL KFDFGRDGIR ARGEVLATPP ALRKLPSNKG
LEALLLVPKG LPMAGTLIAL SERGLDADGN IVGFLIGGKT PGPFAVRRRD DFDISDACLL
PDGELLVLER KFSLLTGAGI RIRRIALRSL APGAVIDGPS IFDADLGDEI DNMEGLDVHR
GAAGDLVVTL VSDDNFSMIQ RTLLLQFTLL EE