Gene RPC_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0536 
Symbol 
ID3970777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp578637 
End bp579296 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID637923652 
Productheat shock protein DnaJ-like 
Protein accessionYP_530430 
Protein GI90422060 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.957898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.590428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG ATTCATCAAA ATTCTTCGAC AGTATCCGCA TCAAGCCGAA CAAGCTGAGC 
GCGAAGCAGC AAGCGGCTGC GCGCGAGGCC GCGGTGATGT GCGAAGCCCC GGGCTGTACC
AACAAGGGGC CGCATCGCGC GCCGAAGGGC CGCGGCGCCG AGAAGGAATA CTGGCACTTC
TGTCTCAACC ACGTCCGCGA ATACAACCAG GGCTATAATT TTTTCCAGGG CATGGCCGCC
GATGCGGTGG CGCGTTATCA GAAAGACGCG CTGACCGGGC ATCGCCCGAC CTGGAAGATG
GGCGCCAACG GCACCAAGGG CAAAGGCAAG TCCGCCGACG CCGATCTGGA ATCCGCCGCC
GATCCGTTCC ACATGTTCAG CGAACTCAAC GGCCGCGGCC GCTGGCGTCC GGGTCCCGGC
TCCGCCGCCG AGGAACCCAA GCCGGAAACC CGCAAGGTGT TCAACGCCGA ACGCAAGGCG
CTGCAGGTGA TGGGGCTCGG CGCCGACGCC ACGCTGGAAA CCGTGAAGGC GAAGTACAAG
TCGCTGGTCA AGCAGCATCA CCCCGACGCC AATGGCGGCG ACCGTTCCAC CGAAGATCGC
CTCATCGAGA TCATCAAGGC GTACAACTAC CTGAAGACGG TGGTCCGCGG CGCGAGCTGA
 
Protein sequence
MAIDSSKFFD SIRIKPNKLS AKQQAAAREA AVMCEAPGCT NKGPHRAPKG RGAEKEYWHF 
CLNHVREYNQ GYNFFQGMAA DAVARYQKDA LTGHRPTWKM GANGTKGKGK SADADLESAA
DPFHMFSELN GRGRWRPGPG SAAEEPKPET RKVFNAERKA LQVMGLGADA TLETVKAKYK
SLVKQHHPDA NGGDRSTEDR LIEIIKAYNY LKTVVRGAS