Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0536 |
Symbol | |
ID | 3970777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 578637 |
End bp | 579296 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637923652 |
Product | heat shock protein DnaJ-like |
Protein accession | YP_530430 |
Protein GI | 90422060 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.957898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.590428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCG ATTCATCAAA ATTCTTCGAC AGTATCCGCA TCAAGCCGAA CAAGCTGAGC GCGAAGCAGC AAGCGGCTGC GCGCGAGGCC GCGGTGATGT GCGAAGCCCC GGGCTGTACC AACAAGGGGC CGCATCGCGC GCCGAAGGGC CGCGGCGCCG AGAAGGAATA CTGGCACTTC TGTCTCAACC ACGTCCGCGA ATACAACCAG GGCTATAATT TTTTCCAGGG CATGGCCGCC GATGCGGTGG CGCGTTATCA GAAAGACGCG CTGACCGGGC ATCGCCCGAC CTGGAAGATG GGCGCCAACG GCACCAAGGG CAAAGGCAAG TCCGCCGACG CCGATCTGGA ATCCGCCGCC GATCCGTTCC ACATGTTCAG CGAACTCAAC GGCCGCGGCC GCTGGCGTCC GGGTCCCGGC TCCGCCGCCG AGGAACCCAA GCCGGAAACC CGCAAGGTGT TCAACGCCGA ACGCAAGGCG CTGCAGGTGA TGGGGCTCGG CGCCGACGCC ACGCTGGAAA CCGTGAAGGC GAAGTACAAG TCGCTGGTCA AGCAGCATCA CCCCGACGCC AATGGCGGCG ACCGTTCCAC CGAAGATCGC CTCATCGAGA TCATCAAGGC GTACAACTAC CTGAAGACGG TGGTCCGCGG CGCGAGCTGA
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Protein sequence | MAIDSSKFFD SIRIKPNKLS AKQQAAAREA AVMCEAPGCT NKGPHRAPKG RGAEKEYWHF CLNHVREYNQ GYNFFQGMAA DAVARYQKDA LTGHRPTWKM GANGTKGKGK SADADLESAA DPFHMFSELN GRGRWRPGPG SAAEEPKPET RKVFNAERKA LQVMGLGADA TLETVKAKYK SLVKQHHPDA NGGDRSTEDR LIEIIKAYNY LKTVVRGAS
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