| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0526 |
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| Symbol | |
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| ID | 3970806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 566706 |
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| End bp | 569549 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923642 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_530420 |
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| Protein GI | 90422050 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.723301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.383723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCG CGCTCGCCCG TAGGCTCTTC GGCTCCCCTA ACGACCGACG GATCAAGGCC
TATCAACCCC GTGTGGATGC CATCAACGCG CTGGAGCCGG AGCTGGTGGC GTTGTCCGAC
GAGGCGCTGC GGGGACGAAC CGCGGAATTT CGTCAGCAAC TGGCCGACGG CAAGACGCTC
GACGACATTC TGGTGCCGGC CTTCGCCACG GTGCGCGAGG CCGCCAAGCG CACGCTCGGC
CAGCGGCATT TCGACGTGCA GTTGATCGGC GGCATGGTGC TGCACGAGGG CGACATCGCC
GAAATGAAGA CCGGCGAAGG CAAGACCCTG GTCGCCACGC TCGCGGTCTA TCTCAACGCG
CTGGCCGGCA AGGGCGTCCA CGTCGTCACC GTCAACGATT ATCTGGCGCG GCGCGACTCC
GCCTGGATGG GCGAGATCTA CGGCTTCCTC GGCATGACCA CCGGCGTCAT CGTCCACGGC
CTCGACGATC AGCAGCGCCA GGCCGCCTAT GCCTGCGACA TCACCTACGG CACCAACAAC
GAATACGGCT TCGACTATCT GCGCGACAAC ATGAAGTACC GGCTGGAGGA CATGGTCCAG
CGCGGTCACT ACTACGCCAT CGTCGACGAA GTCGACTCGA TCCTGATCGA CGAAGCCCGT
ACCCCGCTGA TCATCTCCGG TCCGCTCGAC GACCGCTCGG AGTTCTACAA CACCATCGAC
ACCTTCATGC CGTCGCTCGA CAAGGCGACC GACTACGAGG TCGACGAGAA GCAGCGCACC
GTGACGCTGA CCGAAGCCGG CATGGAGCAC ATCGAGGTGC TGCTGCGCGA CGCCGGCCAG
CTCAAGGGCG ACTCGCTGTA CGACGTCGAG AACGTCTCGG TGGTGCACCA CGTCAACCAG
GCGCTGCGCG CCCATTCGCT GTTCCAGCGC GACAAGGATT ACATCGTCCG CGACGACGAA
GTGGTCATCA TCGACGAATT TACCGGCCGG ATGATGCCGG GACGGCGTTA TTCGGAGGGC
CTGCATCAGG CGCTGGAAGC CAAGGAGCAC GTCCAGGTCC AGCCGGAAAA CCAGACCCTG
GCCTCGATCA CCTTCCAGAA CTACTTCCGG ATGTACGAAA AGCTGTCCGG CATGACCGGC
ACGGCGCTGA CCGAAGCCGA CGAATTGTTC GACATCTACA AGCTCGAAGT GGTCGAGATC
CCGACCAACG TGCAGATCGC CCGGCTCGAC GAAGACGACG AGGTGTATCG CACCCAGAGC
GAGAAATACG CCGCGATCCT CGCCGAGGTG GAGCGCGCCA ATTCGCGGCT GCAGCCGGTC
TTGGTCGGCA CCGCCTCGAT CGAGAAGTCC GAGGTGCTCG GCGAGTATCT GAAGAAGCAC
GGCTACAAGC AGATCGACTT CACCGACCCG AAGGGTATGG AGAAGCTTTA TGCGGCGGCT
CGCGCGGGCA AGCCGGCCAA GCTGTTCGCG GTGCTGAACG CCCGCTTTCA CGAGCAGGAA
GCCTATATCG TCGCCGAGGC CGGCGTGCCC GGCGCGATCA CCATCGCCAC CAACATGGCC
GGCCGCGGCA CCGACATCAA ACTCGGCGGT TCGCTGGAGA TGCGGATCCA GCACGAGACC
GTCGGCATCA CCGACGAGGC CGAAAAGGCC GCCAAGATCG AACTCATCAA GGCCGACATC
GAGCGTTTCC GCGAGATCGT GCTGAAGGCC GAGGAGGTCG TCGAGGTCGA ACCCGCTAAG
GGCAACAAGC CGGCCAAGAC CCTGACCCGG CCGGGCGGGC TCTACATCAT GGGCTCGGAG
CGTCACGAAT CCCGCCGCAT CGACAATCAG CTGCGCGGCC GAAGCGGCCG TCAGGGCGAT
CCCGGCCGCT CGAAGTTCTT CCTGTCGCTG GAAGACGATC TGATGCGGAT CTTCGGCTCC
GACCGGCTCG ACACCATGCT GACGCGGCTC GGCCTGAAAG AGGGCGAGGC GATCATCCAC
CCGTGGATCA ACAAGGCGCT GGAGAAGGCG CAGCAGAAGG TCGAGGCGCG CAACTTCGAC
ATCCGCAAGA ATCTGTTGAA GTTCGACAAC GTCCAGAACG ACCAGCGCAA GGAAATCTTC
GATCACCGCA TCAGCCTGAT GAAGGACGAC AGCGTCGCCG AAACCGTCGC CGGGATGCGG
CACGATTTCA TCGACGACAT CGTCGCCAAG CACGTGCCGG AACACGCCTA TGCCGAGCAG
TGGGACGTCG CCGGGCTGAA GGAAGAGCTG GAGCGCGTGC TCGGGCTCGA CCTGCCGGTC
GACGAATGGG CCAAGGAAGA AGGCATCGCC GACGAGGAAC TGCTGACAAG GATCGAGCAG
CGCGTCGACG AACACATGGC GGCCAAGGTG GGGCAGTGGG GCCCCGAGGT GATGCGCTAC
GCCGAGAAAT CGATCCTGTT GCAGACGCTG GATCATCTGT GGCGCGAGCA TCTGGTGATG
CTCGACCATC TGCGCAACGT CATCGGGCTG CGCGGCTACG GCCAGCGCGA CCCGTTGCAA
GAATACAAGT CGGAAGCCTT CGCGCTGTTC GAGGCGATGA TCACGCATCT GCGCGAGGCC
GTCACCGCGC AGCTGATGCG GGTCGAGATC GTGCCGCCCG AGCAGCCGCA GGAGCTGCCG
CCGATGGAAG GCCACAAGTT CAACGCCGAC ACCGGCGAGG ACGATATGGC GTTCGCCAAT
GTCTCGCTGG CGCCGGCCGA CAATGCCGAC AAGACCGCGC GCAATCCGAA CGATCCTTCG
ACTTGGGGCA AGGTCGGCCG CAACGAGGAC TGCCCCTGCG GCTCCGGCAA GAAGTACAAG
CACTGCCACG GGCGATACGC GTAA
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| Protein sequence | MIGALARRLF GSPNDRRIKA YQPRVDAINA LEPELVALSD EALRGRTAEF RQQLADGKTL
DDILVPAFAT VREAAKRTLG QRHFDVQLIG GMVLHEGDIA EMKTGEGKTL VATLAVYLNA
LAGKGVHVVT VNDYLARRDS AWMGEIYGFL GMTTGVIVHG LDDQQRQAAY ACDITYGTNN
EYGFDYLRDN MKYRLEDMVQ RGHYYAIVDE VDSILIDEAR TPLIISGPLD DRSEFYNTID
TFMPSLDKAT DYEVDEKQRT VTLTEAGMEH IEVLLRDAGQ LKGDSLYDVE NVSVVHHVNQ
ALRAHSLFQR DKDYIVRDDE VVIIDEFTGR MMPGRRYSEG LHQALEAKEH VQVQPENQTL
ASITFQNYFR MYEKLSGMTG TALTEADELF DIYKLEVVEI PTNVQIARLD EDDEVYRTQS
EKYAAILAEV ERANSRLQPV LVGTASIEKS EVLGEYLKKH GYKQIDFTDP KGMEKLYAAA
RAGKPAKLFA VLNARFHEQE AYIVAEAGVP GAITIATNMA GRGTDIKLGG SLEMRIQHET
VGITDEAEKA AKIELIKADI ERFREIVLKA EEVVEVEPAK GNKPAKTLTR PGGLYIMGSE
RHESRRIDNQ LRGRSGRQGD PGRSKFFLSL EDDLMRIFGS DRLDTMLTRL GLKEGEAIIH
PWINKALEKA QQKVEARNFD IRKNLLKFDN VQNDQRKEIF DHRISLMKDD SVAETVAGMR
HDFIDDIVAK HVPEHAYAEQ WDVAGLKEEL ERVLGLDLPV DEWAKEEGIA DEELLTRIEQ
RVDEHMAAKV GQWGPEVMRY AEKSILLQTL DHLWREHLVM LDHLRNVIGL RGYGQRDPLQ
EYKSEAFALF EAMITHLREA VTAQLMRVEI VPPEQPQELP PMEGHKFNAD TGEDDMAFAN
VSLAPADNAD KTARNPNDPS TWGKVGRNED CPCGSGKKYK HCHGRYA
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