Gene RPC_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0519 
Symbol 
ID3970799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp560975 
End bp561316 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID637923635 
Productglutaredoxin GrxC 
Protein accessionYP_530413 
Protein GI90422043 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02181] Glutaredoxin, GrxC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.223671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGAGCA TGGTCCGAAA ACCGGAATCC CTTTTCGGGA TCATGCTCCA GCAACCTGAG 
TGTGACATGA GCGCTGCTAT CGAAATCTTC ACGCGGCCGG GCTGTGGCTA TTGCAGCGCC
GCCCGTTCGC TGCTGACCCG CAAGAAAGCG GCGTTCACCG AATACGACGT CTCACTCGAC
CCGAGCTTTC GCGAGCAGAT GACGAAGCGG GTCGGCGCCG GCGCCACCTA TCCGCAGATT
TTCATCGGCG AACTCCATGT CGGCGGCTGC GACGACCTTT ATGATCTCGA CCGCGCCGGC
AAGCTGGATT CGCTGCTCGC CGGCGAAACG GCCGCTTCAT GA
 
Protein sequence
MMSMVRKPES LFGIMLQQPE CDMSAAIEIF TRPGCGYCSA ARSLLTRKKA AFTEYDVSLD 
PSFREQMTKR VGAGATYPQI FIGELHVGGC DDLYDLDRAG KLDSLLAGET AAS