| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0512 |
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| Symbol | prfA |
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| ID | 3970792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 551875 |
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| End bp | 552960 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923628 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_530406 |
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| Protein GI | 90422036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.1342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCTGC TCCCCGAAAC CAAACTCGAC GTGCTGCTCG CCCACCACGC CTCGCTGGAA
AACCAGCTGC AGAGCCAGGT CGGCGCCGAC ACCTATGTGA AGCTGATGCG CGAGCTCGCC
GAGCTCAATC CGCTGATCGA GGCGGTGAAA GCCTATCGGC AGGTTGGCGC GGAACGCGGC
GAGATCGACG CGCTGCTCGC CGATGCTGCG ACCGATGCCG AGATGCGGGC GATGGCGGAG
GCCGAGCACG CCGCGCTCGA GGCGCAGGAG GCCGAACTGG CGCAGCAGAT CCGCGTCGCG
CTGCTGCCCA AGGACGCGAT GGACGACCGC AACGTGATGC TGGAAATCCG CGCCGGCACC
GGCGGCGACG AGGCCTCGCT GTTCGCCGGC GACCTGTTCC GGATGTACGA GAAATTCGCC
GTCCTGCAGG GCTGGAGCGT CGAGGTGGTG TCGGCCTCCG AGGGTACCAT GGGCGGCTAC
AAGGAAATCA TCGCCGAGGT GAAGGGCCGC GGCGCCTTCG CCAAACTGAA GTTCGAATCC
GGCGTGCACC GGGTGCAGCG GGTGCCCGAC ACCGAGACGC AAGGCCGCAT CCACACCTCG
GCGGCCACCG TGGCGGTGCT GCCCGAGGTC GAGGAGGTCG ACGTCGACAT CAAGCCCGAC
GACCTGCGGA TCGAGACCAT GCGGGCGCAG GGCGCCGGCG GCCAGCACGT CAACAAGACC
GAATCGGCGA TCCGCATCAC CCATATCCCG ACCGGGCTGC AGGTGATGAT GCAGGACAGC
CGCTCGCAGC ACAAAAACCG CGCCTCGGCG ATGAACATTT TGCGCTCGCG CATCTACGAC
GCCGAACAGC AGCGGATCGA TTCGGTGCGC TCCGCCGAGC GCAAGGAAAA GGTCGGCTCC
GGCGACCGCT CGGAGCGGAT CCGGACCTAT AATTTTCCGC AAGGCCGGGT CACCGACCAC
CGCATCAATC TGACGCTGTA CAAGCTGCCG CAGGTGATCG CCGGCGAAGC CTTGGGCGAA
CTGATCGACG CGCTCACCAC CGAGCACCAG GCCGCCCAGC TCGCGGCACA GGGCAACGCG
GCGTGA
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| Protein sequence | MSLLPETKLD VLLAHHASLE NQLQSQVGAD TYVKLMRELA ELNPLIEAVK AYRQVGAERG
EIDALLADAA TDAEMRAMAE AEHAALEAQE AELAQQIRVA LLPKDAMDDR NVMLEIRAGT
GGDEASLFAG DLFRMYEKFA VLQGWSVEVV SASEGTMGGY KEIIAEVKGR GAFAKLKFES
GVHRVQRVPD TETQGRIHTS AATVAVLPEV EEVDVDIKPD DLRIETMRAQ GAGGQHVNKT
ESAIRITHIP TGLQVMMQDS RSQHKNRASA MNILRSRIYD AEQQRIDSVR SAERKEKVGS
GDRSERIRTY NFPQGRVTDH RINLTLYKLP QVIAGEALGE LIDALTTEHQ AAQLAAQGNA
A
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