Gene RPC_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0505 
Symbol 
ID3970267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp545293 
End bp546018 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID637923621 
Productacetoacetyl-CoA reductase 
Protein accessionYP_530399 
Protein GI90422029 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0483754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTG TGGCGTTGGT GACCGGAGGA ACACGAGGAA TTGGGGCGGC GATCAGCAAG 
GCGTTGAAGG CGGCGGGTTA TCATGTCGCA GCCAACTACG CGGGCAACGA CGCGGCGGCG
GATAAATTCA AGGCCGAGAC GGGAATTCCG GTTTTCAAAT GGGATGTCAG TTCGTTCGAT
GCCTCGGTGG AAGGCGTCAA GAAGGTGGAA GCCGAGCTCG GCCCGGTCGA AATCCTGGTC
AACAATGCGG GCATCACCCG CGACGGCGCG TTTCACAAAA TGACGCTCGA TCAATGGAGC
GCGGTGACCA GCACCAATCT GGGCTCGCTG TTCAACGTCA CCCGGCAGGT GATCGAGGGC
ATGCGCGGCC GCAAATTCGG CCGCATCATC AACATCTCCT CGGTCAACGG CCAGAAGGGC
CAGTTCGGCC AGGTCAATTA CTCTGCAGCG AAGGCCGGCG ATCTCGGCTT CACCCGGGCG
CTGGCGCTGG AGACCGCGCG CGGCGGCATC ACGGTGAATG CGATCTGCCC CGGCTACATC
AATACCGAGA TGGTGCAGGC GGTGCCGAAA GAGGTTTTGG AGAAGAACAT TCTGCCGCTG
ATCCCGGTCA ACCGGCTCGG CGAGCCGGAG GAGATCGCCC GCGCGGTGGT GTTCCTCGCC
GCCGACGATG CCGGCTTCAT CACCGGCTCG ACGCTGTCGA TCAATGGCGG GCAATCGATG
GGCTGA
 
Protein sequence
MARVALVTGG TRGIGAAISK ALKAAGYHVA ANYAGNDAAA DKFKAETGIP VFKWDVSSFD 
ASVEGVKKVE AELGPVEILV NNAGITRDGA FHKMTLDQWS AVTSTNLGSL FNVTRQVIEG
MRGRKFGRII NISSVNGQKG QFGQVNYSAA KAGDLGFTRA LALETARGGI TVNAICPGYI
NTEMVQAVPK EVLEKNILPL IPVNRLGEPE EIARAVVFLA ADDAGFITGS TLSINGGQSM
G