Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0505 |
Symbol | |
ID | 3970267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 545293 |
End bp | 546018 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637923621 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_530399 |
Protein GI | 90422029 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0483754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTG TGGCGTTGGT GACCGGAGGA ACACGAGGAA TTGGGGCGGC GATCAGCAAG GCGTTGAAGG CGGCGGGTTA TCATGTCGCA GCCAACTACG CGGGCAACGA CGCGGCGGCG GATAAATTCA AGGCCGAGAC GGGAATTCCG GTTTTCAAAT GGGATGTCAG TTCGTTCGAT GCCTCGGTGG AAGGCGTCAA GAAGGTGGAA GCCGAGCTCG GCCCGGTCGA AATCCTGGTC AACAATGCGG GCATCACCCG CGACGGCGCG TTTCACAAAA TGACGCTCGA TCAATGGAGC GCGGTGACCA GCACCAATCT GGGCTCGCTG TTCAACGTCA CCCGGCAGGT GATCGAGGGC ATGCGCGGCC GCAAATTCGG CCGCATCATC AACATCTCCT CGGTCAACGG CCAGAAGGGC CAGTTCGGCC AGGTCAATTA CTCTGCAGCG AAGGCCGGCG ATCTCGGCTT CACCCGGGCG CTGGCGCTGG AGACCGCGCG CGGCGGCATC ACGGTGAATG CGATCTGCCC CGGCTACATC AATACCGAGA TGGTGCAGGC GGTGCCGAAA GAGGTTTTGG AGAAGAACAT TCTGCCGCTG ATCCCGGTCA ACCGGCTCGG CGAGCCGGAG GAGATCGCCC GCGCGGTGGT GTTCCTCGCC GCCGACGATG CCGGCTTCAT CACCGGCTCG ACGCTGTCGA TCAATGGCGG GCAATCGATG GGCTGA
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Protein sequence | MARVALVTGG TRGIGAAISK ALKAAGYHVA ANYAGNDAAA DKFKAETGIP VFKWDVSSFD ASVEGVKKVE AELGPVEILV NNAGITRDGA FHKMTLDQWS AVTSTNLGSL FNVTRQVIEG MRGRKFGRII NISSVNGQKG QFGQVNYSAA KAGDLGFTRA LALETARGGI TVNAICPGYI NTEMVQAVPK EVLEKNILPL IPVNRLGEPE EIARAVVFLA ADDAGFITGS TLSINGGQSM G
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