| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0496 |
|---|
| Symbol | |
|---|
| ID | 3970258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 536657 |
|---|
| End bp | 537343 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923612 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530390 |
|---|
| Protein GI | 90422020 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4291] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.399025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0200352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGG ATGCGCTCGA CGATCCGCAT CTCGCGCGCT TCCGCAAACT GCCGCGACCG
GTCCGCGTGG TCTATGCGCG GCCGCGCACC TTCGTGGCGA TCGCGGCCGG CGCCGCGGCG
TACTTCGTGC TGCCGGATCA GCTGCGGCTG GTGACCCGGC TGCTGCTGAG CTGGGACATC
TTCATCGGTC TGTATCTGGC GCTGGTGCTC GGCATGGTGC TGCGCAGCGG CATCGCCCAT
ATCCGCCGCA ACGCCATCCT GCAGGACGAC GGCCGCTTCC TGATCCTGCT GGTGACCGCG
CTCGGCGCCT TCGCCAGCAT GGCGGCGATC GTCTCCGAAC TCGGCGCCTC ACATCGCGGA
TCGGCGGAAC TGGTGCTGGC AACGCTGACC ATCGCGCTGT CGTGGTCGAT GGTGCACACT
ACTTTCGCGC TGCACTACGC GCATGATTAC TATCGCGGCG CCAAGCCCGG CGGACTGCAG
TTTCCCAGCG GCGACAGCCA TGAGGACGTC GACTACTGGG ACTTCGTGTA CTTCTCTTTC
GTGATCGGGA TGACCGCGCA GGTCTCCGAC GTCGGCATCA CCGACAAGAC CATCCGCCGC
ACCGCCACCG CGCACGGCGT GGTGTCGTTC GTGTTCAACA CCGCGTTGGT CGCCCTGATG
GTCAACATCG CCGCCAGCGC GATCTGA
|
|---|
| Protein sequence | MAADALDDPH LARFRKLPRP VRVVYARPRT FVAIAAGAAA YFVLPDQLRL VTRLLLSWDI
FIGLYLALVL GMVLRSGIAH IRRNAILQDD GRFLILLVTA LGAFASMAAI VSELGASHRG
SAELVLATLT IALSWSMVHT TFALHYAHDY YRGAKPGGLQ FPSGDSHEDV DYWDFVYFSF
VIGMTAQVSD VGITDKTIRR TATAHGVVSF VFNTALVALM VNIAASAI
|
|---|
| |