Gene RPC_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0494 
Symbol 
ID3970256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp535809 
End bp536252 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID637923610 
ProductBLUF 
Protein accessionYP_530388 
Protein GI90422018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.303595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0369715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGA AGCTTTATCG TCTGGTCTAT TTCAGCAAGA ACCGGATCTT GGGCGGCCCG 
AGCAGCATCG CCATCGAGGT CGAGTCGATC CTGCACGCCG CGCAGCGCAA CAATGCGCGG
CTCGACATCA CCGGCGCGCT GATTTTCAAC ACCGGCATTT TCGCCCAGGT GTTGGAAGGG
CCGCGCGACG GCGTCGAAGC CATCTTCGAA AAAATCCAGC AAGACACCCG CCATGGCGAC
GTCCAGGTGC TCGCCTTCGA CATCACCAAG GAGCGCACCT TCGCGCAATG GTCGATGGGA
TTCTTCGGGC GTTCTCGCGA GGGCCATGAC CTGTTCGGTC ATATCGCCGT CGCCACCGGC
TTCACCACGG CGCGGATCGA AGGCGCGCGG CTGTTCCAGA TCGTCCGCGA TCTCGCCTTC
GAGGAAGAAT CCCGCGTCGC TTGA
 
Protein sequence
MDPKLYRLVY FSKNRILGGP SSIAIEVESI LHAAQRNNAR LDITGALIFN TGIFAQVLEG 
PRDGVEAIFE KIQQDTRHGD VQVLAFDITK ERTFAQWSMG FFGRSREGHD LFGHIAVATG
FTTARIEGAR LFQIVRDLAF EEESRVA