| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0491 |
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| Symbol | ispG |
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| ID | 3970253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 530581 |
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| End bp | 531870 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923607 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_530385 |
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| Protein GI | 90422015 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.909822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0499083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC TCGAAAACCC GCTTTCGCAC GATGTCGCCG GCCCTGCGCC GCGGCACAAA
ACCACCCAGG TCATGGTCGG CGACGTCGCC GTCGGCGGCG GCGCGCCGAT CGTCGTGCAA
TCGATGACCA ATACCGACAC CGCTGATGTG GCGGGCACGG TGGAGCAGGT CGCTGCATTG
ACCCGCGCCG GCTCCGAACT GGTGCGGATC ACGGTGGATC GCGAGGAAGC CGCGGCCGCG
GTGCCGCATA TCCGCGACGC GCTGCGCAAG CGCGGCATCA CCACGCCGTT GATCGGCGAC
TTCCATTACA TCGGCCACAA GCTGCTCGCC GACTACCCGG CCTGCGCCGA GGCGCTCGAC
AAGTACCGCA TCAATCCGGG CAATGTCGGC TTCAAGAACA AGCGCGACAG CCAGTTCGCC
GACATCGTTG AGATCGCGAT CAAGAACAAC AAGGCGGTGC GGATCGGCGC CAATTGGGGC
TCGCTCGATC AGGAATTGTT GACCAAGCTG ATGGACGAAA ACGCCGTCTC GGCCAAGCCG
CGCGACGTCC GCGCGGTGAC CCGCGAGGCG ATGGTGCAGT CGGCGCTGCT GTCGGCCGCG
CGGGCCGAGG AGATTGGCCT TGCGAAGAAC AAGATGGTGC TGTCCGCCAA GGTCTCGGCG
GTGCAGGACC TGATCGCGGT GTATCAGGAT CTGGCCTCGC GCTCGGATTA CGCCATCCAT
CTCGGCCTCA CCGAGGCCGG CATGGGCTCC AAGGGCATCG TCGCCTCCTC GGCGGCGCTC
GGCATCCTGC TGCAGCAGGG CATCGGCGAC ACCATCCGGA TTTCGCTGAC GCCGGAGCCC
GGTGGCGATC GTTCGCTGGA AGTCCAGGTC GCGCAGGAGC TGCTGCAGAC CATGGGCTTC
CGCACCTTCG TGCCGCTGGT GGCGGCCTGC CCGGGCTGCG GCCGCACCAC CTCGACCACG
TTCCAGGAAC TGGCGCGCTC GATCCAGGAC TTCATCCGGG TCGAAATGCC GGCCTGGAAG
ACCCGCTATC CCGGCGTGGA AAATCTCAAC GTCGCGGTGA TGGGCTGCAT CGTCAACGGC
CCCGGCGAGA GCAAGCACGC CAATATCGGC ATCTCGCTGC CCGGCACCGG CGAGACCCCG
GCGGCGCCGG TGTTCGTCGA CGGCCAGAAA TTCCGCACCC TGCGCGGCGC CAACATCTCC
GGCGAGTTCA AGGCGCTGGT GATCGACTAC ATTGAGCAGC GCTACGGCGC TGGTGTCGCG
GCGCCGGTGA CGGTGACCGC GGCGGAGTAA
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| Protein sequence | MNKLENPLSH DVAGPAPRHK TTQVMVGDVA VGGGAPIVVQ SMTNTDTADV AGTVEQVAAL
TRAGSELVRI TVDREEAAAA VPHIRDALRK RGITTPLIGD FHYIGHKLLA DYPACAEALD
KYRINPGNVG FKNKRDSQFA DIVEIAIKNN KAVRIGANWG SLDQELLTKL MDENAVSAKP
RDVRAVTREA MVQSALLSAA RAEEIGLAKN KMVLSAKVSA VQDLIAVYQD LASRSDYAIH
LGLTEAGMGS KGIVASSAAL GILLQQGIGD TIRISLTPEP GGDRSLEVQV AQELLQTMGF
RTFVPLVAAC PGCGRTTSTT FQELARSIQD FIRVEMPAWK TRYPGVENLN VAVMGCIVNG
PGESKHANIG ISLPGTGETP AAPVFVDGQK FRTLRGANIS GEFKALVIDY IEQRYGAGVA
APVTVTAAE
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