Gene RPC_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0488 
Symbol 
ID3970250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp528263 
End bp528745 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID637923604 
ProductMarR family transcriptional regulator 
Protein accessionYP_530382 
Protein GI90422012 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.123923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.124611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG GTTCCGTGGA TCTAAATTTT CTGTTTACGC TCGCCGAGGT GCAGCGCCTG 
GTGCGCTGCT ATGCCGACAA GGCGGCGTCG CGCTACGGCA TCACCCGCGC GCAATGGGCG
GTGCTCGCCA AGGTCGAGCG CTGCGAAGGC CTCAAGCAAT CCGAGCTCGC CGAAATGCTG
GAGATGCAGC CGATCACGCT GACGCGATTG ATCGACCGGC TGTGCGAGCA CGGCTGGATC
GAGCGGCGCA GCGACGACAC CGACCGCCGC GCCAAACGTC TCTATCTGCG CAAGGCCGCG
CGCCCCTTGC TCGGCAAATT GACCGGGTTG CGCTCTGAAC TCACCGCCAC CGCGCTGGCG
GGAATTAGCC CCGTCGACGT CCACCGGCTC GTCGGCCATC TCGAAACCAT CAGGGAAAAC
GTCCGCACCG CGATCCACGA CGCGCATGCG GCGCCTCAAC GAAAGATCCA GCGGCATGGC
TGA
 
Protein sequence
MPRGSVDLNF LFTLAEVQRL VRCYADKAAS RYGITRAQWA VLAKVERCEG LKQSELAEML 
EMQPITLTRL IDRLCEHGWI ERRSDDTDRR AKRLYLRKAA RPLLGKLTGL RSELTATALA
GISPVDVHRL VGHLETIREN VRTAIHDAHA APQRKIQRHG