| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0485 |
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| Symbol | |
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| ID | 3970247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 524727 |
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| End bp | 525461 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923601 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_530379 |
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| Protein GI | 90422009 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0605] Superoxide dismutase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.7715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0683375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTAC TGTCCCGACG CCATCTGATG ATGGCCGCTA CCGGCATCGT CGCTGCCGCG
GCCGCGCCGC GCCTGGCGTT CGCGCAGGCC ACGACGGCGG CGCCGACAGG CCCGTTCACG
CTGCCGCCGC TGCCCTATCC GGTCGCGGCG CTGGAGCCGC ATATCGACGC CAAGACCATG
GAAATCCACC ATGGCAAGCA CCACCAGGCC TATGTCAGCA ATCTCAACAA TTTCGCCAAG
GACAACCCGA AGCTGGCGTC GATGCCGGTG CCCGAGGTGC TGGGCAATCT CGGCGACGTG
CCGGAGGCGA TCCGCACCGG CGTGCGCAAC AACCTCGGCG GCCACGCCAA TCACACCATG
TTCTGGCAGA TCATGGGCCC GAACGGCGGC AAGCCGGCCG GCGACGTGTT GGCCGCGATC
GACCGCGACC TTGGCGGCAT GGAGAAATTC CAGGCCGATT TCAACGCTGC CGGCGGCCGG
CAGTTCGGTT CGGGCTGGGT GTTCGTCACC GTCAGCAAGG ACGGCAAGCT GGCGATCGAG
ACCCGGCCGA ACCAGGACAA TCCAATGATG GACGGCAAGC GCGCCCTGCT CGGCAACGAC
GTCTGGGAAC ACGCTTACTA TCTCAGTTAC CAGAACCGCC GCGCCGATTA TCTCAAGGCC
TGGTGGAATA CGGTGAACTG GAACAAAGTC AGCGAACGCT ACGCCGCCGC CAAGGCCGGT
CAGCTCGGCA TTTGA
|
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| Protein sequence | MSLLSRRHLM MAATGIVAAA AAPRLAFAQA TTAAPTGPFT LPPLPYPVAA LEPHIDAKTM
EIHHGKHHQA YVSNLNNFAK DNPKLASMPV PEVLGNLGDV PEAIRTGVRN NLGGHANHTM
FWQIMGPNGG KPAGDVLAAI DRDLGGMEKF QADFNAAGGR QFGSGWVFVT VSKDGKLAIE
TRPNQDNPMM DGKRALLGND VWEHAYYLSY QNRRADYLKA WWNTVNWNKV SERYAAAKAG
QLGI
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