| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0482 |
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| Symbol | truB |
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| ID | 3970244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 520535 |
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| End bp | 521698 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923598 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_530376 |
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| Protein GI | 90422006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.266724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.260963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA CCACCGCCAC CGCCGCGATC GAGCCGCCGA GCGATGAGCC GATCGACGTG
ACCACTCCGA ATTCGGCCGC GATGGTGTCC GATCAGTTAA CGCTGCAGCC CGACCAGGAC
GGCGGTGAGC TCGGCGACCG CGCGCCGCGC GCTAACAACG ATCCGCGGCA GAACGGCCGC
GGCGGCAAGC CAAAGCAGAA CGGCCAACCG CGCCGCGACA AGCGCGACGT CCACGGCTGG
GTGGTGCTGG ACAAGCCGAT CGGCATGACC TCGACCCACG CGGTCGCGGT GGTGAAGCGG
CTGTTTTCCG CCAAGCGCGC CGGCCACGCC GGCACGCTGG ATCCGTTGGC CTCCGGCGGC
CTGCCGATCG CGATGGGCGA AGCCACCAAG ACCGTCCCCT TCGTGATGGA CGGCCGCAAG
CGCTATCGCT TCACCGTGGC CTGGGGCGAG GAGCGCGACA CCGACGACAC CGAGGGCCGC
GCCACCGCGA CCAGCGAGCT GCGGCCGAGC GTCGAGGCGA TTCGCGCGCT GCTGCCGCAA
TTCACCGGCG AGATCGAACA GACCCCGCCG CAATATTCCG CGATCAAGAT CGCGGGCGAG
CGGGCCTACG ACATGGCGCG CGACGGCGAA ATCGTGCCGC TGGTTCCCCG CCCGGTGGTG
ATCCACGAAT TAACCCTGGT GGATCAGCCG GATGAGGGCC ATTCGACGTT CGAGGCGGAA
TGCGGCAAGG GCACCTATGT GCGGGCTTTG GCGCGCGATA TGGGGAGAAT TCTGGGCTGT
TACGGCCATA TCTGCGCGCT GCGCCGCACC CTGGTCGGGC CGTTCGGCGA GCAAGATATG
ATTCCGCTGG AACAGTTGGA GGCTTTATGC GATAGAGCCG CGTCCGGCGA GGGTAGCCTC
GCCGACGCGC TTTTGCCCGT TGAGACCGCG CTGGACGACA TCCCGGCGCT GGCCGTCACA
CGGGCTGATG CGGCAAGGCT CCATCGGGGC CAGGCCGTTT TGTTGCGCGG ACGGGATGCG
CCCAACTGTA GCGGCACAGT TTATGTCACG GTGGCAGGCC GGCTTCTGGC CCTCGCCGAA
CTTGGCAATG GCGAACTCAT CCCCAAGCGC GTGTTCAACC TGAACGGACT GACCGCCAGT
TCGCAGCCTA AGGAAAGTAA CTGA
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| Protein sequence | MNETTATAAI EPPSDEPIDV TTPNSAAMVS DQLTLQPDQD GGELGDRAPR ANNDPRQNGR
GGKPKQNGQP RRDKRDVHGW VVLDKPIGMT STHAVAVVKR LFSAKRAGHA GTLDPLASGG
LPIAMGEATK TVPFVMDGRK RYRFTVAWGE ERDTDDTEGR ATATSELRPS VEAIRALLPQ
FTGEIEQTPP QYSAIKIAGE RAYDMARDGE IVPLVPRPVV IHELTLVDQP DEGHSTFEAE
CGKGTYVRAL ARDMGRILGC YGHICALRRT LVGPFGEQDM IPLEQLEALC DRAASGEGSL
ADALLPVETA LDDIPALAVT RADAARLHRG QAVLLRGRDA PNCSGTVYVT VAGRLLALAE
LGNGELIPKR VFNLNGLTAS SQPKESN
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