Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0473 |
Symbol | |
ID | 3970235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 510669 |
End bp | 511085 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637923589 |
Product | XRE family transcriptional regulator |
Protein accession | YP_530367 |
Protein GI | 90421997 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.54052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTA AAGCGCCCAA CCCTGTTGAC AAATATGTCG GCAGCCGTGT GCGCATGCGG CGCATCATGC TCGGCATGAG TCAGGAAAAA CTTGGCGAAG CGCTCGGGCT GACGTTCCAG CAAGTTCAGA AATACGAAAA GGGCACCAAC CGCGTTGGCG CCAGCCGCAT CCAGCAGATC TCCGAGATTC TGCAGGTGCC GGTGTCGTTC TTGTTCGAAG GAGGTCCGGG TGGTCTGGCC AAAGCCGACG GTTTCGCCGA AGCGGCGTCG CCGGCCTATG TGTCGGATTT TCTCGCCACC TCCGAAGGCC TGGCGCTGAC CCGCGCGTTC ACGCGGATCA CCGATTCCAA GCTGCGTCGA AGCATCGTCG ATCTGGTCGA ACAGATCGCC TCGCGCGAAG CGCCCGATCA ACGCTGA
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Protein sequence | MSTKAPNPVD KYVGSRVRMR RIMLGMSQEK LGEALGLTFQ QVQKYEKGTN RVGASRIQQI SEILQVPVSF LFEGGPGGLA KADGFAEAAS PAYVSDFLAT SEGLALTRAF TRITDSKLRR SIVDLVEQIA SREAPDQR
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