Gene RPC_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0462 
Symbol 
ID3970224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp499907 
End bp501088 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID637923578 
Productalanine racemase-like 
Protein accessionYP_530356 
Protein GI90421986 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGA CCGACATGCT GGCGCCCGCC TCAAACCCCG GCACGCCACG CCTGCAAGAG 
CTGGCGACGC CCTGCCTGCT GCTCGACGAG GCGCGGTTGC GCGGCAACGT TGCGACCATG
AAACGGCATC TGGAGATGCT GGGCGTCGGC TTCCGGCCGC ATCTGAAGAC CGCCAAATGC
CTGGAGGTGG CGCGGATCGC GATGACCCAT CCGGGCGGCC CGGCGACGGT GTCGACCCTG
CGCGAGGCGG AGTTCTTCGC CGCGGGCGGG GTGCGCGACA TGATCTATGC CGTCGGCATC
GCGCCGCAAA AGCTCGACCG CGTCGGCGCG ATCCGCAAAC GCTTCGGCGC CGATCTCGCG
GTGATCCTCG ACAGCGTTGA GCAGGCCGAC GCGGTGGTCG AGTGGGTCAA GGCCAATGCC
GATGCGCTGC CGGTGCTGAT CGAGGTCGAC GCCGACGGCC ACCGCTCCGG CGTCGCGCCG
AACGACGCGG CCACGCTGAC CGCGATCGGA CGGCGGCTGA TCGAGGGCGG CGCTGACCTG
CGCGGCGTGC TGCTGCATGC CGGGGACAGC TACGGTCTCA GCGATCCCGC GGCGATCGCG
GCTGCGGCGG AAGCCGAGCG GGCGGCCGCG GTCGGCGCCG CGACGCAGCT GCGCCACGCC
GGGCTGCCGT GCCCGGTGGT CAGCATCGGC TCGACCCCGA CCGCGCGCTT CGCCAAGGAG
CTTGCCGGCA TCACGGAAGT GCGGGCCGGC GTGTTCATGA TCGGCGATCT GGTGCAGGCC
GGCATCGGCG CCTGCGCGAT CGACGACATC GCGCTGTCGG TGCTCGGCAG CGTGATCGGC
CAGCAACGCG CCAAAGGCTG GATCATCGTC GACGCCGGCT GGATGGCGCT GTCGCGCGAT
CGCGGCACCG CGCGGCAGGC GGTGGATCAG GGCTACGGCC TGGTCTGCGA TCTTGCCGGG
CAGCCCTATC CGGACCTGAT CGTCAAGGAC GCCAACCAGG AACACGGCAT CGTCGCGGTT
CGCCCCGGCA GCGGCGCCGC GTTGCCCGAT CTGCCGATCG GCGCGCAGCT GCGCATTCTG
CCCAACCACG CCTGCGCCAC CGGGGCCCAG CACGACCGCT ATCACGTGCT CGACGATGCC
GGCGCCGTGA GTGCGATCTG GCCGCGGATC AACGGCTGGT GA
 
Protein sequence
MMETDMLAPA SNPGTPRLQE LATPCLLLDE ARLRGNVATM KRHLEMLGVG FRPHLKTAKC 
LEVARIAMTH PGGPATVSTL REAEFFAAGG VRDMIYAVGI APQKLDRVGA IRKRFGADLA
VILDSVEQAD AVVEWVKANA DALPVLIEVD ADGHRSGVAP NDAATLTAIG RRLIEGGADL
RGVLLHAGDS YGLSDPAAIA AAAEAERAAA VGAATQLRHA GLPCPVVSIG STPTARFAKE
LAGITEVRAG VFMIGDLVQA GIGACAIDDI ALSVLGSVIG QQRAKGWIIV DAGWMALSRD
RGTARQAVDQ GYGLVCDLAG QPYPDLIVKD ANQEHGIVAV RPGSGAALPD LPIGAQLRIL
PNHACATGAQ HDRYHVLDDA GAVSAIWPRI NGW