Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0462 |
Symbol | |
ID | 3970224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 499907 |
End bp | 501088 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637923578 |
Product | alanine racemase-like |
Protein accession | YP_530356 |
Protein GI | 90421986 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGAGA CCGACATGCT GGCGCCCGCC TCAAACCCCG GCACGCCACG CCTGCAAGAG CTGGCGACGC CCTGCCTGCT GCTCGACGAG GCGCGGTTGC GCGGCAACGT TGCGACCATG AAACGGCATC TGGAGATGCT GGGCGTCGGC TTCCGGCCGC ATCTGAAGAC CGCCAAATGC CTGGAGGTGG CGCGGATCGC GATGACCCAT CCGGGCGGCC CGGCGACGGT GTCGACCCTG CGCGAGGCGG AGTTCTTCGC CGCGGGCGGG GTGCGCGACA TGATCTATGC CGTCGGCATC GCGCCGCAAA AGCTCGACCG CGTCGGCGCG ATCCGCAAAC GCTTCGGCGC CGATCTCGCG GTGATCCTCG ACAGCGTTGA GCAGGCCGAC GCGGTGGTCG AGTGGGTCAA GGCCAATGCC GATGCGCTGC CGGTGCTGAT CGAGGTCGAC GCCGACGGCC ACCGCTCCGG CGTCGCGCCG AACGACGCGG CCACGCTGAC CGCGATCGGA CGGCGGCTGA TCGAGGGCGG CGCTGACCTG CGCGGCGTGC TGCTGCATGC CGGGGACAGC TACGGTCTCA GCGATCCCGC GGCGATCGCG GCTGCGGCGG AAGCCGAGCG GGCGGCCGCG GTCGGCGCCG CGACGCAGCT GCGCCACGCC GGGCTGCCGT GCCCGGTGGT CAGCATCGGC TCGACCCCGA CCGCGCGCTT CGCCAAGGAG CTTGCCGGCA TCACGGAAGT GCGGGCCGGC GTGTTCATGA TCGGCGATCT GGTGCAGGCC GGCATCGGCG CCTGCGCGAT CGACGACATC GCGCTGTCGG TGCTCGGCAG CGTGATCGGC CAGCAACGCG CCAAAGGCTG GATCATCGTC GACGCCGGCT GGATGGCGCT GTCGCGCGAT CGCGGCACCG CGCGGCAGGC GGTGGATCAG GGCTACGGCC TGGTCTGCGA TCTTGCCGGG CAGCCCTATC CGGACCTGAT CGTCAAGGAC GCCAACCAGG AACACGGCAT CGTCGCGGTT CGCCCCGGCA GCGGCGCCGC GTTGCCCGAT CTGCCGATCG GCGCGCAGCT GCGCATTCTG CCCAACCACG CCTGCGCCAC CGGGGCCCAG CACGACCGCT ATCACGTGCT CGACGATGCC GGCGCCGTGA GTGCGATCTG GCCGCGGATC AACGGCTGGT GA
|
Protein sequence | MMETDMLAPA SNPGTPRLQE LATPCLLLDE ARLRGNVATM KRHLEMLGVG FRPHLKTAKC LEVARIAMTH PGGPATVSTL REAEFFAAGG VRDMIYAVGI APQKLDRVGA IRKRFGADLA VILDSVEQAD AVVEWVKANA DALPVLIEVD ADGHRSGVAP NDAATLTAIG RRLIEGGADL RGVLLHAGDS YGLSDPAAIA AAAEAERAAA VGAATQLRHA GLPCPVVSIG STPTARFAKE LAGITEVRAG VFMIGDLVQA GIGACAIDDI ALSVLGSVIG QQRAKGWIIV DAGWMALSRD RGTARQAVDQ GYGLVCDLAG QPYPDLIVKD ANQEHGIVAV RPGSGAALPD LPIGAQLRIL PNHACATGAQ HDRYHVLDDA GAVSAIWPRI NGW
|
| |