| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0454 |
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| Symbol | |
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| ID | 3970216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 489560 |
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| End bp | 491053 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923570 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_530348 |
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| Protein GI | 90421978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCA CCGCTGCCGC CCGTTCCCAA TCCACTGCGC TTTCGCTGCG CGATCGTCTG
AAGCATCCCG CGCTGTTGCG CGAGGCCTGC TACATCGACG GGCAATGGAC CGGCACGCCT
GAGACCGTTG TCAGCAACCC GGTCAACGAC CTCGAACTCG GCCGGGTGCC GAAGCTCGGA
GCGACCGAAG CCACGCAGGC GGTGGAAGCG GCGCAACGTG CGTTTCCGGC CTGGGCTAAA
CTCACCGCCA AGCAGCGCTC CAACATCATG CGCAAATGGT ACGAACTGAT CGTCGCCAAC
CGCGAAGATC TGGCGCTGAT CCTCACTTCC GAACAAGGCA AGCCGCTGAC CGAAGCACTC
GGCGAAGTCG ACATCGGCGC CGCCTATGTG GAGTTCTTCG CCGAGGAAGC CCGCAGGGTT
TATGGCGAGA CCATTCCGAC GCAGCGGCCG GATGCCCGGC TGATCGCCAT CAAGCAGCCG
ATCGGGGTGT GCGGCGCGAT CACGCCGTGG AATTTTCCCA ATTCGATGAT CACCCGCAAG
GTGTCGCCGG CGCTCGCCGC CGGCTGCACC GTGGTACTGA AGCCCGCCAA CGAGACGCCG
TTCTCGGCGC TGGCGCTCGC CGCCTTGGCG GAGCAGGCCG GACTGCCGAA CGGCGTGTTC
AACATCGTCA CCGGCCACGC CTCGGCGATC GGCAAGGTGT TGTGCGAGCA TCCGGCGGTG
CGCTTCGTCG GCTTCACCGG CTCCACCGAA GTCGGCAAGA TCCTGTATCA GCAGGCCGCG
GTGGGCGTGA AGAAGCTCGG GCTCGAGCTC GGCGGCAACG CGCCGTTCAT CGTGTTCGAC
GACGCCGATG TCGATGCCGC GGTGGACGGC GCGATGGTGT CGAAATATCG CAACATGGGC
CAGACCTGCG TCTGCGCCAA CCGGATCTAC GTCCAGGACG GCGTCTATGA CGCCTTTGTC
GAGAAACTCG CCGCCAAGGT CGGCGCCATG ACAATCGGCG ACGGCACCGA GCCCGGCGTC
ACCCAAGGCC CGCTGATCAA TCAGGCCGCG GTGGAGAAGA CCGAGCGCCA CATCGCCGAC
GCCGTTGCCA ACGGCGCCAC CATCGTGATC GGCGGCAAGC GCCATGCGCG CGGCGGCACG
TTCTTCGAGC CGACCGTGCT CGCCAACGTC AAGCCCGACG CGCTGGTGGC GCATGAGGAA
ACTTTTGGCC CGCTGGCGCC GGTGTTCCGC TTCAAAACCG AAGAGGAAGT GATCAAGCTC
GCCAACGACT CGCCTTTCGG GCTCGCCTCC TACTTCTACG CCCGCGATCT CGGCCGGGTG
TGGCGCGTCG CTGAAGCGCT GGAGGCCGGC ATGGTCGGCG TCAATTCCGG GCTGATCACC
ACCGAAGTGG CGCCGTTCGG CGGCGTCAAG GAAAGTGGCC TCGGCCGCGA AGGCTCGCAT
CACGGCATGG AGGACTATGT CGAGATCAAA TACGTGATGA TGGCGGGGAT TTGA
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| Protein sequence | MSTTAAARSQ STALSLRDRL KHPALLREAC YIDGQWTGTP ETVVSNPVND LELGRVPKLG
ATEATQAVEA AQRAFPAWAK LTAKQRSNIM RKWYELIVAN REDLALILTS EQGKPLTEAL
GEVDIGAAYV EFFAEEARRV YGETIPTQRP DARLIAIKQP IGVCGAITPW NFPNSMITRK
VSPALAAGCT VVLKPANETP FSALALAALA EQAGLPNGVF NIVTGHASAI GKVLCEHPAV
RFVGFTGSTE VGKILYQQAA VGVKKLGLEL GGNAPFIVFD DADVDAAVDG AMVSKYRNMG
QTCVCANRIY VQDGVYDAFV EKLAAKVGAM TIGDGTEPGV TQGPLINQAA VEKTERHIAD
AVANGATIVI GGKRHARGGT FFEPTVLANV KPDALVAHEE TFGPLAPVFR FKTEEEVIKL
ANDSPFGLAS YFYARDLGRV WRVAEALEAG MVGVNSGLIT TEVAPFGGVK ESGLGREGSH
HGMEDYVEIK YVMMAGI
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