| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0448 |
|---|
| Symbol | rplT |
|---|
| ID | 3970210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 483539 |
|---|
| End bp | 483898 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923564 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_530342 |
|---|
| Protein GI | 90421972 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCG TCAAACGCGG TGTGACGGCT CACGCCAAGC ATAAGAAAGT CTACAAGCTC
GCCAAGGGTT TCCGTGGCCG GCGCAAGAAC ACCATCCGCA CCGCCAAGGC CGCCGTCGAC
AAGGCCGGCC AGTATGCGTT CCGCGATCGC AAGCGCAAGA AGCGCACGTT CCGCGCGCTG
TGGATCCAGC GCATCAACGC CGCGGTCCGT CCGCTCGGCA TGACCTACAG CGTGTTCATC
AACGGCCTCG CCAAGTCCGG CGTGATGGTC GACCGCAAGG TGCTGTCGGA TCTGGCGATC
ACCGAACCGG CGGCGTTCCT GGCGATCGCC GAAAAGGCCA AGGCTGCTCT CGCGGCGTAA
|
|---|
| Protein sequence | MARVKRGVTA HAKHKKVYKL AKGFRGRRKN TIRTAKAAVD KAGQYAFRDR KRKKRTFRAL
WIQRINAAVR PLGMTYSVFI NGLAKSGVMV DRKVLSDLAI TEPAAFLAIA EKAKAALAA
|
|---|
| |