| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0425 |
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| Symbol | |
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| ID | 3970820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 456597 |
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| End bp | 457634 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923540 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_530319 |
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| Protein GI | 90421949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.404539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTAGAG TAACGGTTCT GGCTGCGGCC GGCGGCGGTG TTTTGGCGAT CGTGATCGGT
GCCACGGCAA GCCACATGTT CTTCAACAAA GCGTCCGATG CGGCCGAGGT CCAGGCCGAA
TTGACCACCG GCACGGTGGC GGCGCGATGG CCGACGCCGC GCGCCGACGC CACCGAATCC
ACCGCAGCGG CGCCGAGCGT CGCGACGCCG CAGACCCGCG CCGCCGAGGC CGCGAAGACC
AGTGCGAGCT GCAGCCATCC CGGCGCGCTC GGCGTCTCGC GCACGGTGCA GATCGATGCC
GCGGGCGGTC CCGGCTTCGG CCTCACGCAA TATCGCGACT ACGACTTCCT GCAGCCCGGC
GAAGTGGTGC TGTCGTTCGA TGACGGACCC TGGCCGGTGA ACACCCGCGC GGTGCTGGCG
GCGCTGGAGG CCGAATGCGT CAAGGCGGTG TTCTTCCCGA TCGGCAAACA CGCCTCTTGG
CATCCGGCGA TCCTCAAGGA CGTGGTGGCG CAGGGCCACA CCATCGGCTC GCACACCTGG
TCGCACGTCA ACCTCGCCAA GAAATCGCTG CAGGAAGCCA AGGACGAAAT CGAGAAGGGC
TTCAGCGCCA TCGCGATTGC GGCCGGCCGG GCGCCGGCGC CGTTCTTCCG CTTTCCGCAG
CTGCGTCAGA CCCCGGAATT GAAGGCCTAT CTCGGCGAAC GCAACATCGC GGCGTTCTCG
ATCGACGTCG ACTCCAAGGA TTTCGCGATC CATGAGCCCG ACGCCGTGGT GAGCTCGATC
ATGACCAAGC TGCAAAAGGC CGGCAAGGGC ATCATCCTGA TGCACGACTT CCAGCACAGC
ACCGCGCTGG CGATGCCGCA GGTGCTGCAG CAGCTGAAGG CCGGCGGCTA CAAGGTGGTG
CACGTCACCG CCAAGGACGC CGTGGTCACG CTGCCGCAAT ATGATTCCGC GGTCGCCGCA
TTGATGCCGC CGGCACCCGC GGTCAGCGCG CGCGCCACCG CCGGCGTGGT GCGCACCGTC
TCGGGTGCAG CGAATTAG
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| Protein sequence | MRRVTVLAAA GGGVLAIVIG ATASHMFFNK ASDAAEVQAE LTTGTVAARW PTPRADATES
TAAAPSVATP QTRAAEAAKT SASCSHPGAL GVSRTVQIDA AGGPGFGLTQ YRDYDFLQPG
EVVLSFDDGP WPVNTRAVLA ALEAECVKAV FFPIGKHASW HPAILKDVVA QGHTIGSHTW
SHVNLAKKSL QEAKDEIEKG FSAIAIAAGR APAPFFRFPQ LRQTPELKAY LGERNIAAFS
IDVDSKDFAI HEPDAVVSSI MTKLQKAGKG IILMHDFQHS TALAMPQVLQ QLKAGGYKVV
HVTAKDAVVT LPQYDSAVAA LMPPAPAVSA RATAGVVRTV SGAAN
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