| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0417 |
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| Symbol | |
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| ID | 3970812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 448854 |
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| End bp | 449531 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923532 |
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| Product | OstA-like protein |
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| Protein accession | YP_530311 |
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| Protein GI | 90421941 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAAGC TGCAGATGAC CGGTCGAACC TTGGGAGGCG CATGCGTTGC GATGCTGGTC
GTCGCAGCGC TCGGCGTTGC TCCGGCGGCC GCGCAGGCCG GGATGACCGG CGTCCCCAAC
GCCATGCAGG GCTTTTCGCA AAATCGCGAC AAGCCGATCC AGATCGAAGC CGCCACGCTC
GAAGTCCGCG ACAAAAAGAA AGAAGCCACC TTCACCGGCG ACGTCAAAGT GGTGCAGGGC
GACACCACCA TGACCTCCAG GATTCTGGTG GTGTTCTACG ATCAGGAGCA GCCGGCGAGT
GCCGAGCCGA CGCCGGGCCG TTCGGCCAAG GCCGCAGCGA AGCCGCAAAT GACCGCCGCC
GCCCCCGGCC CCGGCGGCGG ATCGTCGATC CGCCGACTGG AGGCCAAAGG CAACGTCGTG
GTGACCCAGA AGGACCAGGT GGTCACCGGC GATACCGCGG TGTTCGACAC CAAGACCAAT
CTGGTGACCA TGCTTGGCGG AGTTGTGCTG ACCCAGGGCA AGAACGTGGT GCGCGGCGAC
CGGCTGCTGG TCGATATGAC GACCGGCGTG TCGCGGGTCG AGTCGGGCAG CGGGCGGGTT
CAGGGGCTGT TCCAGTCCTC CCCCGGCGCA GGGCCGCTCG GGACGGCGCC GCCGCCGAAT
TCGGCCAAGC CGAAATAG
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| Protein sequence | MTKLQMTGRT LGGACVAMLV VAALGVAPAA AQAGMTGVPN AMQGFSQNRD KPIQIEAATL
EVRDKKKEAT FTGDVKVVQG DTTMTSRILV VFYDQEQPAS AEPTPGRSAK AAAKPQMTAA
APGPGGGSSI RRLEAKGNVV VTQKDQVVTG DTAVFDTKTN LVTMLGGVVL TQGKNVVRGD
RLLVDMTTGV SRVESGSGRV QGLFQSSPGA GPLGTAPPPN SAKPK
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