| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0404 |
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| Symbol | |
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| ID | 3970856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 437561 |
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| End bp | 438877 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923519 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_530298 |
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| Protein GI | 90421928 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTC GACATGTCGG CCTGGCGGCG ACGCTTTCGC TTGCGTTGGG ACTCGCTTCG
CCTGCGCTTG CTGCGACCGA GATCCAGTGG TGGCACGCCA TGACCGGCGC CAACAACGAC
GTCATCGTCA AGCTCGCCGA AGAGTTCAAC GCCGCGCAGA CCGACTACAA GGTGGTGCCG
TCCTATAAGG GCAGCTATCC CGACACCATG AACGCCGGCA TCGCGGCGTT CCGCGCCGGC
AACGCGCCGC ATATCATCCA GGTGTTCGAG GTCGGCACCG CCACCATGAT GGCAGCGACC
GGGGCGGTGA AGCCGGTCTA CAAGTTGATG GCGGAGGCCG GAGAGAAATT CGACTCGCAG
GCCTATCTGC CGGCGATCAC CGGCTACTAC TCGACCTCGA AGGGTGAGAT GCTGTCGTTC
CCGTTCAACT CGTCCTCGAT GGTGATGTGG ATCAACAAGG ACGCCTTGAA GAAGGCCAAC
ATCGCCGAGA TCCCGAAGAC CTGGCCGGAG GTGTTCGAAG ACGCCAAGAA ATTGAAGGCG
GCGGGCTACG CCACCTGCGG CTTCTCCACC GCCTGGGTGA CCTGGGCCAA TCTCGAGCAA
TTGTCGGCCT GGCACAACGT GCCGCTGGCG AGCCGGGCCA ACGGCCTCGA CGGCTTCGAC
ACCAAGCTCG AATTCAACGG CCCGCTGCAG ATCAAGCATC TGGAGACGCT GATCGCGCTG
CAGAAGGACA AGACCTACGA TTATTCCGGC CGCACCAACA CTGGAGAAGG CCGTTTCACC
TCCGGCGAAT GCCCGATCTT CCTGAGTTCC TCGGGCTTCT TCGGCCAGGT CAAAGGCAAC
GCCAAGTTCG ATTGGACCAA CGCGCCGATG CCGTATTATC CGGACGTTCA AGGCGCGCCG
CAGAACTCGA TCATCGGCGG CGCCTCGCTG TGGGTGATGG GCGGCAAGTC GCCGGCGGAA
TACAAGGGCG TCGCCAAGTT CCTCAGCTTC CTGTCCGACA CCGACCGTCA GGTCGCGATC
CACAAGGCCT CTGGCTATCT GCCGATCACC AAGGCGGCCT ACGCCAAGGC CCAGGAGGAA
GGCTTTTACG TCAACGCGCC GTATCTGGAG ACGCCGCTCA GGGAATTGAC CAACAAACCG
CCGACCGAAA ACTCCCGCGG ACTGCGGCTC GGCAACATGG TGCAGCTGCG CGACATCTGG
GCGGAAGAAA TCGAATCCGC GCTGGCCGGC AAGAAGACCG CCAAGGACGC GCTCGACACC
GCAGTGACCC GCGGCAACGC CATGCTGCGG CAGTTCGAAC GCACGGTGAG CAAGTAG
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| Protein sequence | MALRHVGLAA TLSLALGLAS PALAATEIQW WHAMTGANND VIVKLAEEFN AAQTDYKVVP
SYKGSYPDTM NAGIAAFRAG NAPHIIQVFE VGTATMMAAT GAVKPVYKLM AEAGEKFDSQ
AYLPAITGYY STSKGEMLSF PFNSSSMVMW INKDALKKAN IAEIPKTWPE VFEDAKKLKA
AGYATCGFST AWVTWANLEQ LSAWHNVPLA SRANGLDGFD TKLEFNGPLQ IKHLETLIAL
QKDKTYDYSG RTNTGEGRFT SGECPIFLSS SGFFGQVKGN AKFDWTNAPM PYYPDVQGAP
QNSIIGGASL WVMGGKSPAE YKGVAKFLSF LSDTDRQVAI HKASGYLPIT KAAYAKAQEE
GFYVNAPYLE TPLRELTNKP PTENSRGLRL GNMVQLRDIW AEEIESALAG KKTAKDALDT
AVTRGNAMLR QFERTVSK
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