Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0400 |
Symbol | |
ID | 3970851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 433640 |
End bp | 435043 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637923514 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_530294 |
Protein GI | 90421924 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGCGCG CAAGCCGTTC GCATCCGGCC GCGCCGGCGC AGAGGAACAC AATCTTGACC CATTCAGCTC ACCCCTCCGG CCAGCCGAGC CCACTTCAAG CGCGCAAGTC CGCGTCCCTG ACCGGCCGGG TGCGGGTGCC GGGCGACAAA TCGATCTCGC ATCGGGCGCT GATTCTCGGC GCGCTGGCGG TCGGCGAAAC CCGGATCAGC GGGCTGCTCG AGGGCGAGGA CGTGCTCAAC ACCGCCAAAG CGATGCGGGC GCTCGGCGCT AGCGTCGAGC GCACCGGCGA TTTTGCCTGG CGGATCCACG GCGTCGGCGT CGGCGGTTTC GCGCAGCCGG CCGCGGCGCT CGATTTCGGC AATTCCGGCA CCGGCTGCCG GCTGGTGATG GGCGCGGTCG CCGGCTGTCC GATCACCGCC ACCTTCGACG GCGACGCCTC GCTGCGCTCG CGGCCGATGC GGCGGATCGT CGATCCATTG GAACTGATGG GCGCACGGGT CATCGACAGC CGCGAGGGCG GCCGGCTGCC GCTGACCCTG CAGGGCGCCC GCGATCCGCT GCCGATCCTC TACCGCACCC CGGTGGCCTC GGCGCAGATC AAGTCCGCGG TGCTGCTGGC GGGGCTGGCG GCGCCCGGAA TCACCACGGT GATCGAGCAG GAGGCCAGCC GCGACCACAC CGAACTGATG CTGAGCCATT TCGGCGCGCA GATCGTCAGC GAGCCCGAAG GCGCGCACGG CCGCAAGATC TCGCTGACCG GGCAGCCCGA GCTGCGCGGG GCGCCGGTGG TGGTGCCGGC CGACCCGTCC TCGGCGGCGT TTCCGATCGT GGCGGCACTG ATCGTGCCGG GCTCCGACAT CGTGCTGACC GAGGTGATGA CCAATCCGCT GCGCACCGGG CTGTTCAAGA CCTTGCGCGA AATGGGCGGC TCGATCGAGG AGAGCGAGGT GCGCGGCGAC GCCGGCGAGC CGATGGCCCA GTTCCGGGTG CGCGCCTCGC AGCTCAAGGG CGTCGAAGTT CCGCCGGAGC GGGCGCCGTC GATGATTGAC GAATATCTGG TGCTGGCGGT GGCCGCCGCC TTCGCCGAGG GCACCACGCG GATGCGGGGC TTGAAGGAAT TGCGGGTCAA GGAGAGCGAC CGGCTGGAAG CCACCGCGGC GATGCTGCGG CTCAACGGCG TTTCGGTCGA GATCGACGGC GACGATCTGA TCGTCGAGGG CCGCGGCCAC GTGCCGGGCG GCGGGCTCGT TGCCACCGAA ATGGATCACC GCATCGCGAT GTCGGCGCTG GTGATGGGGC TCGCCGCCGA CCAGCCGGTG ACCATCGACG ATACCGGCTT CATCGCGACG TCCTTCCCGG ACTTCATCCC GATGATGCGC CGGCTCGGCG CGGAGTTCGG CTGA
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Protein sequence | MMRASRSHPA APAQRNTILT HSAHPSGQPS PLQARKSASL TGRVRVPGDK SISHRALILG ALAVGETRIS GLLEGEDVLN TAKAMRALGA SVERTGDFAW RIHGVGVGGF AQPAAALDFG NSGTGCRLVM GAVAGCPITA TFDGDASLRS RPMRRIVDPL ELMGARVIDS REGGRLPLTL QGARDPLPIL YRTPVASAQI KSAVLLAGLA APGITTVIEQ EASRDHTELM LSHFGAQIVS EPEGAHGRKI SLTGQPELRG APVVVPADPS SAAFPIVAAL IVPGSDIVLT EVMTNPLRTG LFKTLREMGG SIEESEVRGD AGEPMAQFRV RASQLKGVEV PPERAPSMID EYLVLAVAAA FAEGTTRMRG LKELRVKESD RLEATAAMLR LNGVSVEIDG DDLIVEGRGH VPGGGLVATE MDHRIAMSAL VMGLAADQPV TIDDTGFIAT SFPDFIPMMR RLGAEFG
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