| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0391 |
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| Symbol | trpA |
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| ID | 3970880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 424841 |
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| End bp | 425674 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923505 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_530285 |
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| Protein GI | 90421915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.403186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAA TCGACACCCG TTTCGCCGAA CTGAACAAGC AGGGCCGCGC CGCCTTCGTC
ACCTTCCTGA TGGCGGGCGA TCCCGATCTC GACACCTCGC TCGAGCTGAT CAAGGCGCTG
CCGAAGGCCG GCGCCGACAT CATCGAAATC GGCATGCCGT TCACCGATCC GATGGCGGAC
GGCCCGGCGA TCCAGGCCGC CGGCTTGCGC GCGCTGAAGG CCGGCACCAC GCTGAAGAAG
ACGCTGGCTC TGGTGCAGGC GTTCCGCCGC GACGATAACG CCACGCCCGT GGTGCTGATG
GGCTACTACA ATCCGATCTA CATCTACGGC GTCGACAAAT TTCTGGTCGA TGCCAAAGCG
GCCGGCGTCG ACGGCTTGAT CATCGTCGAC CTGCCGCCGG AGGAAGACTC CGAATTGTGC
CTGCCGGCGA TGCAGGCGGG GTTGAATTTC ATTCGGCTGG CGACGCCCAC CACCGACGAC
AAGCGGCTGC CGGCGGTGCT GGCGAACACC TCGGGCTTTG TCTATTACGT CTCGATCACC
GGCATCACCG GCTCGGGCAG CGCGGATTCC GCGGTGGTGG GCCAGGCTGT ACAAAGGATC
AAGCGCCACA CCAAGCTGCC GGTCTGCGTC GGCTTCGGCA TCCGCACCCC GGAGGGCGCC
CGCGACATCG CCCGCCACGC CAACGGCGCG GTGGTCGGCT CGGCGCTGGT CGATGTGCTG
GCCAAAAGCC TGGACAAGGA CGGCCGGGCC ACCGCCGGGA CGGTCGGCGC CGTCGCCGCA
CTGGTCGGCT CGCTGGCCGA GGGCGTCCAT GCGGCGCAGC AGGCGGCCGA ATAG
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| Protein sequence | MTRIDTRFAE LNKQGRAAFV TFLMAGDPDL DTSLELIKAL PKAGADIIEI GMPFTDPMAD
GPAIQAAGLR ALKAGTTLKK TLALVQAFRR DDNATPVVLM GYYNPIYIYG VDKFLVDAKA
AGVDGLIIVD LPPEEDSELC LPAMQAGLNF IRLATPTTDD KRLPAVLANT SGFVYYVSIT
GITGSGSADS AVVGQAVQRI KRHTKLPVCV GFGIRTPEGA RDIARHANGA VVGSALVDVL
AKSLDKDGRA TAGTVGAVAA LVGSLAEGVH AAQQAAE
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