Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0381 |
Symbol | dut |
ID | 3970870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 408696 |
End bp | 409154 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637923495 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_530275 |
Protein GI | 90421905 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG CTATCTCCGC CGCCGTCCAG CAATTGCCGC ATGGCCAGGG CCTCGCGCTG CCGGCCTATC AGAGCGCGCA TGCCGCAGGG CTCGACTTGC TCGCCGCGGT CGCCCCCGAC GCGCCGCTGG TGCTGGCGCC CGGCACCTAC GCGCTGGTGC CGACCGGACT GACGCTGGCA TTGCCGCCCG GCTACGAGGC GCAGGTGCGG CCGCGCTCCG GACTCGCCGC GCGCCACGGC GTCACCGTGC TGAACGCGCC CGGCACCATC GACGCCGACT ATCGCGGCGA GATCGGCGTG CTGTTGATCA ACCACGGCAG CCAGCCGTTC ACGGTCCGGC GCGGCGAGCG AATCGCCCAG ATGGTGGTCG CCCGGGTGGC GCGGGTCGAC CTCACGGTCG CCGCCTCGCT GGAAACCACC GAGCGTGGCA GCGGCGGATT CGGCTCGACC GGCCGCTAA
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Protein sequence | MTVAISAAVQ QLPHGQGLAL PAYQSAHAAG LDLLAAVAPD APLVLAPGTY ALVPTGLTLA LPPGYEAQVR PRSGLAARHG VTVLNAPGTI DADYRGEIGV LLINHGSQPF TVRRGERIAQ MVVARVARVD LTVAASLETT ERGSGGFGST GR
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