| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0374 |
|---|
| Symbol | |
|---|
| ID | 3970902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 400423 |
|---|
| End bp | 401091 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923488 |
|---|
| Product | beta-lactamase-like |
|---|
| Protein accession | YP_530268 |
|---|
| Protein GI | 90421898 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.834872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG CAAGCGAAAC CAAAGCCAAG GCCGGCGCGG CGATCATTCC GGTGACGCTG
TTCCAGCAGA ATTGCACGTT GTTGTGGTGC GAGACCACCC GCAAGGCGGT GGTGGTGGAT
CCCGGCGGCG AGGTGCCGCA GATTCTGGCG GCCATCAAGC AGGCCGAGGT CACGGTCGAG
AAGATCTGGC TGACCCACGG CCATATCGAC CATGTCGGCG GCGCCGCCGA CCTGCGCGAC
GACTTGAAGG TGCCGATCGA AGGCCCGCAT CGCGCCGACA AATATCTGTT GAACAACGTC
GTCACCAGCG GCGAGATGTT CGGCATGACC GGAATGCGCG ATGTGCTGCC GGATCGCTGG
CTCGAAGAGG GCGAAACCGT CAGCGTCGGC GAACTGAGCT TTTCGATTCT GCACTGCCCC
GGGCATTCCC CGGGCAGCGT GGTGTATTTC AACGATCAGA TGCGGTTCGC GCTGGTCGGC
GACGTGCTGT TCAAGGGCTC GATCGGCCGC ACCGACCTGT CCGGCGGCTG CCACGCCACG
CTGATGGAAT CGATCACCCG CAAGCTGCTG CCGCTCGGCG ACGACGTCAG CTTCATCTGC
GGCCACGGCC CGGGCTCGAC CTTGGGCCAC GAGCGGCTGA GCAATCCGTT TCTCACCGGG
GATTTATAA
|
|---|
| Protein sequence | MTDASETKAK AGAAIIPVTL FQQNCTLLWC ETTRKAVVVD PGGEVPQILA AIKQAEVTVE
KIWLTHGHID HVGGAADLRD DLKVPIEGPH RADKYLLNNV VTSGEMFGMT GMRDVLPDRW
LEEGETVSVG ELSFSILHCP GHSPGSVVYF NDQMRFALVG DVLFKGSIGR TDLSGGCHAT
LMESITRKLL PLGDDVSFIC GHGPGSTLGH ERLSNPFLTG DL
|
|---|
| |