Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0371 |
Symbol | |
ID | 3970899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 397551 |
End bp | 398735 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637923485 |
Product | esterase, PHB depolymerase |
Protein accession | YP_530265 |
Protein GI | 90421895 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCTTT CAAAGAACAT CGAATTTCTT CGCCAGCTGC GCAACCTCAA CGGCATCAGC GGGTTGAACG GCGACAGCCG GGCCACGAAG GCCGCGGCGG CAAACAGCCG GCTGACCGAA GCCGCGGATT TCGGGCCCAA TCCCGGCCGA TTGCGGATGC TGTCCTATGT GCCGTCCGAC GCGGTGAAAA AGCCGCCGCT GGTGGTGGTG CTGCACGGCT GCACGCAGAC CGCCGGCGGC TACGACGTCG GCGCCGGCTG GTCGACGCTG GCCAAGCGCT ACGGCTTTGC GCTGCTGATG CCGGAGCAGA CCAACGCCAA CAATCCTAAC CGCTGCTTCA ACTGGTTCGT GCCGGAGGAT ATCCGCCGCG GCGGCGGCGA GGCCGCCTCG ATCCGGCGGA TGATCGAACA AATGGCGGTC GCCCATCATA TCGACCGCGA CCGGGTGTTC GTCACCGGCT TGTCGGCCGG CGGCGCGATG GCCGCGGTGA TGCTCGCGAC CTATCCGGAA ACCTTCGCGG CCGGCGCGGT GATCGCCGGC TTGCCGTTCG GCGTCGCCGG CAATGTGCAG CAGGCGTTGT CCGCGATGAT GCAATCCGCC TCGCGGCCGG CCTCGGAACT CGGCGATCTG GTGCGCGACG CGTCCAGCCA TCGCGGGCCG TGGCCGAAAC TCTCGGTGTG GCACGGCAGC GCCGACCGCA CCGTCAACCC GTCGAATGCC GACGAACTGG TCAAGCAGTG GCTCGACCTG CATCAATTGC CGTCGTCGCC GATGTCGACC GCCAAGGTCG ATGGCTATCC GCGCCAGGTG TGGTGGAACG CAGCCGGAGA AACCGTGGTG GAATCCTACA CCATCACCAA CATGGCGCAC GGCACCCCGC TCGGCACTGG TGAAAATACC GAGAGCTACG GCGCGCAGGG CGCCTACCTG CTCGATGTCG GCATCTCGTC GTCCTACCAC ATCGCCAAAT TCTTCGGCTT GACCGAGCGC GTGCATCGGC CGGCCACCGC CGCCGCGTCG CTGCCGACGG TGCCAGTCGA GCAGCTCGAG GAAATTCCCC GCGCCCGCAA GGCGCGCGCG ACGCAGGATC GCCGCGCCGA GCCGCGCGAT CCGCCGGGCC GCCGCGGCTT CGACGTCAAC GCGGTGATCA CCCGGGCGCT CACCGCCGCC GGGCTGATGA AGTAG
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Protein sequence | MSLSKNIEFL RQLRNLNGIS GLNGDSRATK AAAANSRLTE AADFGPNPGR LRMLSYVPSD AVKKPPLVVV LHGCTQTAGG YDVGAGWSTL AKRYGFALLM PEQTNANNPN RCFNWFVPED IRRGGGEAAS IRRMIEQMAV AHHIDRDRVF VTGLSAGGAM AAVMLATYPE TFAAGAVIAG LPFGVAGNVQ QALSAMMQSA SRPASELGDL VRDASSHRGP WPKLSVWHGS ADRTVNPSNA DELVKQWLDL HQLPSSPMST AKVDGYPRQV WWNAAGETVV ESYTITNMAH GTPLGTGENT ESYGAQGAYL LDVGISSSYH IAKFFGLTER VHRPATAAAS LPTVPVEQLE EIPRARKARA TQDRRAEPRD PPGRRGFDVN AVITRALTAA GLMK
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