Gene RPC_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0371 
Symbol 
ID3970899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp397551 
End bp398735 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content68% 
IMG OID637923485 
Productesterase, PHB depolymerase 
Protein accessionYP_530265 
Protein GI90421895 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTTT CAAAGAACAT CGAATTTCTT CGCCAGCTGC GCAACCTCAA CGGCATCAGC 
GGGTTGAACG GCGACAGCCG GGCCACGAAG GCCGCGGCGG CAAACAGCCG GCTGACCGAA
GCCGCGGATT TCGGGCCCAA TCCCGGCCGA TTGCGGATGC TGTCCTATGT GCCGTCCGAC
GCGGTGAAAA AGCCGCCGCT GGTGGTGGTG CTGCACGGCT GCACGCAGAC CGCCGGCGGC
TACGACGTCG GCGCCGGCTG GTCGACGCTG GCCAAGCGCT ACGGCTTTGC GCTGCTGATG
CCGGAGCAGA CCAACGCCAA CAATCCTAAC CGCTGCTTCA ACTGGTTCGT GCCGGAGGAT
ATCCGCCGCG GCGGCGGCGA GGCCGCCTCG ATCCGGCGGA TGATCGAACA AATGGCGGTC
GCCCATCATA TCGACCGCGA CCGGGTGTTC GTCACCGGCT TGTCGGCCGG CGGCGCGATG
GCCGCGGTGA TGCTCGCGAC CTATCCGGAA ACCTTCGCGG CCGGCGCGGT GATCGCCGGC
TTGCCGTTCG GCGTCGCCGG CAATGTGCAG CAGGCGTTGT CCGCGATGAT GCAATCCGCC
TCGCGGCCGG CCTCGGAACT CGGCGATCTG GTGCGCGACG CGTCCAGCCA TCGCGGGCCG
TGGCCGAAAC TCTCGGTGTG GCACGGCAGC GCCGACCGCA CCGTCAACCC GTCGAATGCC
GACGAACTGG TCAAGCAGTG GCTCGACCTG CATCAATTGC CGTCGTCGCC GATGTCGACC
GCCAAGGTCG ATGGCTATCC GCGCCAGGTG TGGTGGAACG CAGCCGGAGA AACCGTGGTG
GAATCCTACA CCATCACCAA CATGGCGCAC GGCACCCCGC TCGGCACTGG TGAAAATACC
GAGAGCTACG GCGCGCAGGG CGCCTACCTG CTCGATGTCG GCATCTCGTC GTCCTACCAC
ATCGCCAAAT TCTTCGGCTT GACCGAGCGC GTGCATCGGC CGGCCACCGC CGCCGCGTCG
CTGCCGACGG TGCCAGTCGA GCAGCTCGAG GAAATTCCCC GCGCCCGCAA GGCGCGCGCG
ACGCAGGATC GCCGCGCCGA GCCGCGCGAT CCGCCGGGCC GCCGCGGCTT CGACGTCAAC
GCGGTGATCA CCCGGGCGCT CACCGCCGCC GGGCTGATGA AGTAG
 
Protein sequence
MSLSKNIEFL RQLRNLNGIS GLNGDSRATK AAAANSRLTE AADFGPNPGR LRMLSYVPSD 
AVKKPPLVVV LHGCTQTAGG YDVGAGWSTL AKRYGFALLM PEQTNANNPN RCFNWFVPED
IRRGGGEAAS IRRMIEQMAV AHHIDRDRVF VTGLSAGGAM AAVMLATYPE TFAAGAVIAG
LPFGVAGNVQ QALSAMMQSA SRPASELGDL VRDASSHRGP WPKLSVWHGS ADRTVNPSNA
DELVKQWLDL HQLPSSPMST AKVDGYPRQV WWNAAGETVV ESYTITNMAH GTPLGTGENT
ESYGAQGAYL LDVGISSSYH IAKFFGLTER VHRPATAAAS LPTVPVEQLE EIPRARKARA
TQDRRAEPRD PPGRRGFDVN AVITRALTAA GLMK