Gene RPC_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0364 
Symbol 
ID3970892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp388772 
End bp389572 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID637923478 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_530258 
Protein GI90421888 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTG GCGACGAACT CGAACGCTAT GCCCGCCACA TCGTGCTGCG CGAGGTCGGC 
GGCCCCGGCC AGGCCAAGCT GCAGGCCGCC TCGGTGCTGG TGATCGGCGC CGGCGGGCTC
GGCGCGCCGT CATTGATGTA TCTGGCGGCC GCCGGCGTCG GCACACTCGG CGTGGTCGAC
GACGACACCG TGTCGCTGTC CAACCTGCAG CGCCAGATCA TCCACGCCAC CCCGGACATC
GGCCGCAGCA AGGTCGACAG CGCCGAGGAT CGCATCACCG CGCTCAATCC GCACGTCCGT
TTCGTCCGCC ACCCGATGCG GATCGACGCC GACAACGCGA TGCAGTTGAT CGGCAGCTAC
GATATGGTGC TCGACGGCTC GGACAATTTC GCCACCCGCT ATCTGGTGTC CGACGCCTGC
TATCTGGCGC GGAAGCCGCT GATCACCGGC GCGCTCGGGG TGTTCGACGG CTCGCTGACC
ACGATCCGCG CCCATGAGAA GAACGCCGAC GGCGAACTCA ACCCGACCTA TCGCTGCCTG
TTTCCGGAAG CGCCGCCGCC CGGCACGGTG CCGAGCTGCC AGGAGGCCGG CGTGCTCGGC
GCGCTCGCCG GCGTGCTCGG CTCGATGATG GCGCTGGAGG CGATCCGCGA GATCGTCGGC
TTCGGCGAGG GCCTGGTCGG CCGGCTGTTG ATGATCGACG CCCGCGCGAT GCGGTTCGAA
ACCCTGCGCT ACAACCGCGA CCCGGCCAAT CCGTTGAACG GCGATCGGCC GAGCATTTTG
GATCTCAGCG CCCACGCCTG A
 
Protein sequence
MLSGDELERY ARHIVLREVG GPGQAKLQAA SVLVIGAGGL GAPSLMYLAA AGVGTLGVVD 
DDTVSLSNLQ RQIIHATPDI GRSKVDSAED RITALNPHVR FVRHPMRIDA DNAMQLIGSY
DMVLDGSDNF ATRYLVSDAC YLARKPLITG ALGVFDGSLT TIRAHEKNAD GELNPTYRCL
FPEAPPPGTV PSCQEAGVLG ALAGVLGSMM ALEAIREIVG FGEGLVGRLL MIDARAMRFE
TLRYNRDPAN PLNGDRPSIL DLSAHA