| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0362 |
|---|
| Symbol | |
|---|
| ID | 3970890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 384795 |
|---|
| End bp | 385697 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637923476 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_530256 |
|---|
| Protein GI | 90421886 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACGC TGCGTCAACT TCGCTATCTC TCCGCGCTCG CCAAACACGG CCATTTCGGC
CGCGCCGCCG AGGCCTGTTC GGTGACCCAG CCGGCGCTGT CGATGCAGAT CGGCGATCTG
GAGCGCAGGC TCGGGGTCAA GGTGGTGGAG CGGCGGCCCG GCGAGGTTTT GCTGACCGAC
GCCGGCCGCG AGATCGCCCG GCGCGGCGAC GAGGTGCTGA CGGCATCGCG CGACCTCGTC
GATTTCGCCC GCCACCGCGG CAAGCCGTTG ACCGGACGGC TGACGCTCGG CGTGATCCCG
TCGCTGGCGC CGTATCTGCT GCCGAAGATT TTGCCGGCGC TGCAGCGCGG CTATCCCGAG
CTGCGGCTGG AATTGCGCGA GAGCCAGACC CGCTCATTGG TCGGCGACAT CAAGAGCGGC
GTGCTCGACG CCGCCTTGCT GGCGTTGCCG CTGGAGGATT CCGAACTCGA CGCCTTGCCG
CTGTTCGAGG ATCTGTTCCT GCTGGCGGTG CCGGCCGACG ATCCGCGCCC CGACACCGCC
CGCATCGGCG CCCGCGATAT CGATCAGAGC CGGCTGATCC TATTGGAAGA CGGCCATTGC
CTGCGCGACC AGGCCTTGGC GTTCTGCGCC ACCGCGCGGC GCGGCCGGCA GCAGTCCAGC
GCCGGGATGA CGTTCGGCGC CTCCAGCCTG TCGACGGTGA TGCAGATGGT CGCCAACGGC
TACGGCATCA CGCTGATTCC GCAGATCGCC GCCGAGGTCG AGCGCCGCGA CAGCCGGGTG
CGGCTGTTGC GGCTGAAGGA TCCGCAGCCC GGCCGCAGCA TCGGCCTGGT GTTCCGCGCG
ACCTCGCCGC GCAAGGCGGA CTTCACCGCG CTCGGCGAGG TGGTGAAAGA GAGCGTGGGT
TGA
|
|---|
| Protein sequence | MVTLRQLRYL SALAKHGHFG RAAEACSVTQ PALSMQIGDL ERRLGVKVVE RRPGEVLLTD
AGREIARRGD EVLTASRDLV DFARHRGKPL TGRLTLGVIP SLAPYLLPKI LPALQRGYPE
LRLELRESQT RSLVGDIKSG VLDAALLALP LEDSELDALP LFEDLFLLAV PADDPRPDTA
RIGARDIDQS RLILLEDGHC LRDQALAFCA TARRGRQQSS AGMTFGASSL STVMQMVANG
YGITLIPQIA AEVERRDSRV RLLRLKDPQP GRSIGLVFRA TSPRKADFTA LGEVVKESVG
|
|---|
| |