Gene RPC_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0357 
Symbol 
ID3970961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp377763 
End bp378578 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID637923471 
Producthypothetical protein 
Protein accessionYP_530251 
Protein GI90421881 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG TGGTTCATCG CGGCATCGCT GCGCACCGCA TCGGCGCGAT GATCCTGCGC 
TACTGGTACC TGTTGTTGTC GTCCTGGCCG CGGCTGCTGG AACTGGTGTA TTGGCCGGCG
CTGCAAATCA TCACCTGGGG CTTCCTGCAG AACTACATCT CGCAGAATGC CGGGTTCTTC
GCCCAGGCCG GCGGCACGCT GATCGGCGCG GTTGTCCTGT GGGACATCCT GTTCCGCGGC
CAGCTCGGGT TTTCGATCTC GTTCCTCGAA GAGATGTGGG CGCGCAATCT CGGCAACCTG
ATGATGAGCC CGCTGAAGCC GGTCGAGTTC CTGATCGCCC TGATGATCAT GAGCCTGATC
CGGCTGGCGA TCGGCATCGG GCCGATGCTG GCGCTCGCCA CCTGGCTGTT CGACTTCAAC
CTGTTCGGTT TCGGACTGCC GCTGGTGGCG TTCTTCTGCA ATCTGATCTT CACCGGCTGG
TCGCTCGGCA TCTTCGTGTC CGGGCTGGTG CTGCGCAACG GACTCGGCGC CGAAAGTATC
GTCTGGACCG TGATGTTCGG GCTGATGCCG CTGGCCTGCG TGTACTATCC GGTAACGGTG
TTGCCACATT GGCTGCAATA TGTGGCATGG ACGTTGCCAC CGACCTATGT GTTCGAGGGT
ATGCGGGCGC TGCTGATCGA GCACGTATTT CGCCCCGACC TGATGATTTC CGCGTTGCTG
ATCAATGCGG TGCTGTTCGC GGCGTCGTTT ATGAGCTTCA TTTGGCTGCT CAACAGCGCG
CGCCGCCACG GTTCGCTGAT CCAGGGTGGC GAATAA
 
Protein sequence
MSAVVHRGIA AHRIGAMILR YWYLLLSSWP RLLELVYWPA LQIITWGFLQ NYISQNAGFF 
AQAGGTLIGA VVLWDILFRG QLGFSISFLE EMWARNLGNL MMSPLKPVEF LIALMIMSLI
RLAIGIGPML ALATWLFDFN LFGFGLPLVA FFCNLIFTGW SLGIFVSGLV LRNGLGAESI
VWTVMFGLMP LACVYYPVTV LPHWLQYVAW TLPPTYVFEG MRALLIEHVF RPDLMISALL
INAVLFAASF MSFIWLLNSA RRHGSLIQGG E