| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0356 |
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| Symbol | |
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| ID | 3970960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 376322 |
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| End bp | 377650 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923470 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_530250 |
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| Protein GI | 90421880 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACG TCATTGGTGA ATTTGGTCGC CCGCCGGAGT TGCCGGCCGA AGTCAGTCCG
GCGATGACCA CGCCGATGTA CTGGTTCTAC GAACTGGCCC ATGCCTCGCT CAATCCGGCA
CGGGCGTTTG GCGACGTCAC CAAGATCATG TTCCAGAATC CGCTCAACCC GTGGACCCAC
ACCGAACTCG GCAAATCGAT CGCCGCGGCT TGCGAAGTAT TCGAGCGCAC CACGCGGCGC
TACGCCAAGC CGGAATGGGG TCTCGACAGC ACCGAGGTGC TGGGGGTGCG CACCCCGATC
GAGATCGAAT CGGTGTGGGA AAAGCCGTTC TGCCGGCTGT TATATTTCAA CCGCCTGCAT
GAGCGGCCGC TGCGCCACGC GCAGCCGCGG GTGCTGATCG TGGCGCCGAT GTCGGGGCAC
TACGCGACGC TGCTGCGCGG CACCGTCGAA GCCTTTCTGC CGACCCACGA CGTCTACATC
ACCGATTGGT CGGACGCCCG CATGGTGCCG TTGACCGACG GCCGCTTCGA CCTCGACGAC
TATGTCGATT ACGTCATCGA GATGCTGCAG CATCTGGGCG GCAATGTGCA TGTGATCGCG
GTGTGCCAGC CGTCGGTTCC GGTGCTGGCC GCGGTGTCGG TGATGGAGGC CGCGTCCGAT
CCGTTCGTGC CGTTGTCGAT GACGCTGATG GGCGGCCCGA TCGACACCCG CAGCAACCCC
ACCGCGGTGA ACAATCTGGC AGCGGAACGC GGCATCGACT GGTTTCGCAA CCACGTCATC
ACCAAGGTTC CGTTCCCGCA TCCGGGCTTC ATGCGCGACG TCTATCCCGG GTTCCTGCAG
CTGAACGGCT TCATCAGCAT GAATCTCGAC CGCCACATGG ACGCCCACAA GAACCTGTTC
AACCATCTGG TTCAGGGCGA TGGCGACCTC GCCGACAAGC ACCGCGACTT CTACGACGAA
TATCTCGCGG TGATGGATCT GACCGCCGAA TATTATCTGC AGACCGTCGA CGTGGTGTTC
GTCAAGCACT CGCTGCCGAA GGGCGAGATG ATGCACCGGG GCGCCCGGGT CGACCCCAGC
AAGATCAGGC GCACCGCGCT GATGACGGTG GAAGGCGAGA ACGACGACAT CTCCGGCATC
GGCCAGACCG AGGCGACGCA TCGGCTGTGC ACGTCGATCC CGGACGAACG CCGCGTGCAC
TACGTGCAGA AGGGCGTCGG CCATTACGGC GTGTTCAACG GCTCGCGTTT CCGCTCCGAA
ATCGTGCCGC GGATTTCCGA CTTCATGGTG TCGGCGGCGA ATGCCAAGCC GGCCAACGCC
GCGGAGTAG
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| Protein sequence | MPNVIGEFGR PPELPAEVSP AMTTPMYWFY ELAHASLNPA RAFGDVTKIM FQNPLNPWTH
TELGKSIAAA CEVFERTTRR YAKPEWGLDS TEVLGVRTPI EIESVWEKPF CRLLYFNRLH
ERPLRHAQPR VLIVAPMSGH YATLLRGTVE AFLPTHDVYI TDWSDARMVP LTDGRFDLDD
YVDYVIEMLQ HLGGNVHVIA VCQPSVPVLA AVSVMEAASD PFVPLSMTLM GGPIDTRSNP
TAVNNLAAER GIDWFRNHVI TKVPFPHPGF MRDVYPGFLQ LNGFISMNLD RHMDAHKNLF
NHLVQGDGDL ADKHRDFYDE YLAVMDLTAE YYLQTVDVVF VKHSLPKGEM MHRGARVDPS
KIRRTALMTV EGENDDISGI GQTEATHRLC TSIPDERRVH YVQKGVGHYG VFNGSRFRSE
IVPRISDFMV SAANAKPANA AE
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