Gene RPC_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0338 
Symbol 
ID3971019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp358856 
End bp359356 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637923452 
Producthypothetical protein 
Protein accessionYP_530232 
Protein GI90421862 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC TCAGCGAACC CACGACCCAG CTGTTCTCGG CGATGCTGAC GCCGCACCGC 
TCGCTGAGCA AGACCGGGTT TTGGGCGCTG ATGGTTTTCC TCAGCACCGT CAGCTTCGCC
GCCGGGCTGG CGTTCTGGCT GCTCGGCGCC TGGCCGGTGA TGGGGTTCTT CGGGCTCGAC
GTTCTCGCGG TGTATGGGGC GTTCAAGATC AATTTCCGCC ACGCCCGCGC CAGCGAGGAA
ATTTCGGTGA CGCCGTCGGA GTTGCGGGTG CGGCGGGTCA GCCACCGCGG CGATGTCGTC
GAATGGGTGC TGAACCCGCT GTGGGTGCGG CTCGAGCAGA TCATCGACCC CGAATTCGGC
GTCGAAAAAC TCTATCTGGT GTCGCGCGGC CGCCGGCTCG GCGTCGCGAG CTTTTTGGGG
CCGGCCGAAA AGGCCAGCTT CGCCAAGGCG CTCTCCGGAG CCTTGGAGGC GGCGCGGCGC
GGCCTGCTGC ATAACCCGTG A
 
Protein sequence
MTSLSEPTTQ LFSAMLTPHR SLSKTGFWAL MVFLSTVSFA AGLAFWLLGA WPVMGFFGLD 
VLAVYGAFKI NFRHARASEE ISVTPSELRV RRVSHRGDVV EWVLNPLWVR LEQIIDPEFG
VEKLYLVSRG RRLGVASFLG PAEKASFAKA LSGALEAARR GLLHNP