| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0333 |
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| Symbol | |
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| ID | 3971014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 354880 |
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| End bp | 355587 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923447 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_530227 |
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| Protein GI | 90421857 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.44706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA AGCTTGCCGC GCGCGATCGT ATGATCGTGG CGCTGGATCT GCCGAGCGTC
GAGGCCGCCG AGGCGATGAT CGCAAGGCTC GGCGATAGCG CGAGTTTTTA CAAGATCGGC
TACCAATTGG CCTATGCGGG CGGGCTGTCG ATGGTCGGCC GGCTCGCCGA CGCCGGCAAG
AAGGTGTTCG TCGATCTCAA GCTGCACGAC ATCGGCAACA CCGTCGGGCG AGGGGTGGAG
AGCTTGAGCG CGCTCGGCGC CACCTTTCTC ACCGTGCACG CCTATCCGCA GACCATGAAA
GCCGCGGTCG AAGCGCGCGG CGATTCGGGG CTGAAGATTC TCGCCGTTAC CGTGCTGACC
TCCTATGACG ATTCCGATCT GCAGGAGGCC GGCTACCGGC TCGGGGTGCG CGAACTGGTC
GAGCAGCGCG CCCGCCAGGC GCAGGCGATC GGCATCGACG GCCTGGTCTG CTCGCCCGAA
GAGGCGGCGC ATCTGCGCGG CATCGTCGGC CGCAACATCG CTCTGGTGAC GCCCGGGATT
CGCCCGGCCG GGGCCGCGGC GGGCGACCAG AAGCGGATCA TGACGCCCGC GCGCGCCATC
GCCGCCGGCG CGGATTATCT GGTGGTCGGC CGGCCGATCG TCGAGGCGGC CGATCCCAAG
GCCGCCGCCT CAGCCATCGT CGAAGAAATC GCAACCGCAA CGGCTTGA
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| Protein sequence | MSEKLAARDR MIVALDLPSV EAAEAMIARL GDSASFYKIG YQLAYAGGLS MVGRLADAGK
KVFVDLKLHD IGNTVGRGVE SLSALGATFL TVHAYPQTMK AAVEARGDSG LKILAVTVLT
SYDDSDLQEA GYRLGVRELV EQRARQAQAI GIDGLVCSPE EAAHLRGIVG RNIALVTPGI
RPAGAAAGDQ KRIMTPARAI AAGADYLVVG RPIVEAADPK AAASAIVEEI ATATA
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