| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0318 |
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| Symbol | |
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| ID | 3971038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 339356 |
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| End bp | 340408 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923432 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_530212 |
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| Protein GI | 90421842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTTC ATCGTCTCCA GCCTACGGCA TCGAGCGCTG CCGAAATGAC CGCGGCTCTG
CAATCCCAGG TCGACGCGCA GGCAGCGCTG ATCCGGGAGC TGAGCGCGTC GCTCGCCCAT
AGCCGGAAAA TCTTCGATCG CTCCTCGGCC GCGGCCCGGA TCGGCGTCTG GGAATGCACG
CTGCCCGACG AGTCGCTGTC GTGGACCGAT GTGGTCTACG ATCTTTTCGA CCTGCCGCGC
GGCGCGGTGC TCAATCGCCG CCAGCTGCTG GACTGCTATC CAGAAGAATC GGCCCGAGCG
TTGCACCGAC TGCGCAGCAG CGCCATCGAA CAGCTCAGCG GCTTCAGCCT TGATACCGAG
ATCGTCACCG TCAAGGGCAA CCGGCGCTGG ATCCGGATCA CCGCGACGGT GGAGTCCGAG
GACGGCGTTG CGGTGCGCAT CTTCGGCATC AAGCAGGACA TCACCGACGA GAAAATTCTC
GCCGACCGCA CCCGCTACCT CGCCGAATTC GACGTCGTCA CCGGGCTCGC CAACCGCGGC
CGGTTTCAAT CGACGCTGGC GCAGCTCGAC GAGGCGGCCG ACGCCCGACC GTTCGGTGCG
CTGCTGTTGG TCGACCTCGA CGAGTTCAAG GCGGTCAATG ATTGCTTCGG TCACGCCGCC
GGCGACGAAT GCCTGAAGCA GGCTGGACAA CGCATCAGCA AGGCCTGCGG CGACGCCAGG
CTGGTGGCGC GGTTCGGCGG CGATGAATTC GCCGTGCTGC TGGGATCTCA CCAGCGGTTC
GCGGAGATTT CCGAGATCGC CCGCAGCATC ATCGAAGAGA TGCGTCGTCC GATCGTCTTC
CATGGCCACG AGCTGCAGCT TGGTGCCTCC GTCGGCGTTG CCCTGGTCGA TGGCTGCACG
GCGTCGCAAC TTTTTGTCAT GGCCGACAAG GCGCTCTATG CGGCGAAAGA GGCCGGCCGC
GGCACGTTCC GGATTCACAA GCCCGGAACG GGCGGGCGAA CGGCGGCCGT GACGCGACCG
CCGGGCGGAC CGCGCCGGAT CCTGCGCGGC TGA
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| Protein sequence | MPLHRLQPTA SSAAEMTAAL QSQVDAQAAL IRELSASLAH SRKIFDRSSA AARIGVWECT
LPDESLSWTD VVYDLFDLPR GAVLNRRQLL DCYPEESARA LHRLRSSAIE QLSGFSLDTE
IVTVKGNRRW IRITATVESE DGVAVRIFGI KQDITDEKIL ADRTRYLAEF DVVTGLANRG
RFQSTLAQLD EAADARPFGA LLLVDLDEFK AVNDCFGHAA GDECLKQAGQ RISKACGDAR
LVARFGGDEF AVLLGSHQRF AEISEIARSI IEEMRRPIVF HGHELQLGAS VGVALVDGCT
ASQLFVMADK ALYAAKEAGR GTFRIHKPGT GGRTAAVTRP PGGPRRILRG
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