Gene RPC_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0300 
Symbol 
ID3971059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp322106 
End bp323734 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content70% 
IMG OID637923414 
ProductMltA 
Protein accessionYP_530194 
Protein GI90421824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAC ATTTGCCCGA GACGTCGGAT CGCGCGATCC GAACTGGAAG CTGGTCGGCA 
CCGGCAGCGT CCATTAAGCA CGGCGGCTTC CGCGCCGCCG TCTGCGCCGC GCTCGCTGTC
GGGTGCTGGC TCGCGCCGGC GCTGGCCGAA GCCCGGCATC ACGTTCCGCG GCATCGCCAT
CTGGCGGTCT GGCCGCTGGA AATTCCCAAC GGCCAATACG TCCCGGTCGG CTGGGCCGAC
GTCGCCGGTT GGAGCGAAGA CGATCAGCTC GCGGCGTTCA AGGCGTTTCG CGCGAGCTGC
AAGCCGATCG CCGCGCAGCG CGGTCCGCCC AACGAGACCA AGCCGCTCGG CGGCTCGCTC
CGCGAACCCT GCCGCATCGC CCGCGCCGCC GACATCAGCG AGCCGGCGGC GGCTCGGGCG
TTTTTCGAAC GGCATTTTCA TCCGGTGCGG ATTTCCAAGC TCGGCGAGAC CGACGGCTTC
GTCACCGGCT ATTACGAGCC GGTGCTCGAC GGCTCGCGCA CCCGGACCGA CGTCTACACC
GTGCCGGTAT ATCGCCGGCC GTCCAATCTG TTCGTGCGCG GCGTCAGCCA GGGCGCCGCG
GGGCTTCCCA ACAAGGGCGA GGTGTTTCGC AAGATCGGCC GGCGCAAGCT GGTGCCGTAT
TACGATCGCG CCGCGATCGA GGACGGCGCG GTCGCCGGCC GCGGCCTCGA ATTGTGCTGG
CTGAAGAGCC AGACCGATCT TCTGTTCACC CAGATCCAGG GCTCGGCGCG GGTGCGGTTC
GAGGACGGCA CCACGCTGCG AATCAATTAC GACGCGCATA ACGGTTATCC CTACACGCCG
GTCGGCCGCA TCCTGATCGA GCGCAACATC ATCCCGAAAG AGCAGATGTC GATGCAGCGG
ATCCGGCAGT GGATGGAGGA GAATCCCGAC GGCGCCCACG AGCTGCGCCG GCAGAACCGC
TCCTATGTGT TCTTCCGCGC CGTCGATCTG TCCGACAAGG ACGAGGCGGT CGGCGCGCAG
GGCGTGCCGC TGACGCCGGG CCGTTCGATC GCGGTCGACA AGGCGCTCCA CGTCTACGGC
ACGCCGTTTT TCATCGAGGC CGATCTGCCG CTGGACTCGG AGCAATCGGC GACGCCGTTC
CGCCGGCTGA TGGTGGCGCA GGACACCGGC TCGGCGATCG TCGGGCCGGC GCGGGCCGAT
CTGTATTTCG GCGCCGGCGC CGAGGCCGGG CGGGTGTCGG GCCGGCTGCG TCACGGCGCG
CGCTTCGTGA TGCTGCTGCC CAACAGCCTC GATCCGTTGG CGCGGGGACG CACCATGCCG
CTGCCGGAAG CGCGGCCGTC CGCGAAAATC GCAAAACTGT TTCCGCAAAC GGAGCAGCCC
AAGCCGACCG TTGAGCAAAA GCCCGCCGAG CCGCCGTCTG CTGCGCCGTC TGCCAACCCT
GCAACGCCGA GTGCCGAGCC CGCGAAGGCC GCGCCGTCGA CCGCCGAGCG AGCCAGCAAG
CCCGCCGCAG CGGCGGCGGC GGTGCCGTTG CCGGAGGCGC GCCCGGCAAC GGCGCCGGAG
ATCCGCCCGG CGCATCGGCG GCTGCATCGG CCTTGGCGGC ATCATCGCCG CTGGCACGGG
GCGCGATGA
 
Protein sequence
MFGHLPETSD RAIRTGSWSA PAASIKHGGF RAAVCAALAV GCWLAPALAE ARHHVPRHRH 
LAVWPLEIPN GQYVPVGWAD VAGWSEDDQL AAFKAFRASC KPIAAQRGPP NETKPLGGSL
REPCRIARAA DISEPAAARA FFERHFHPVR ISKLGETDGF VTGYYEPVLD GSRTRTDVYT
VPVYRRPSNL FVRGVSQGAA GLPNKGEVFR KIGRRKLVPY YDRAAIEDGA VAGRGLELCW
LKSQTDLLFT QIQGSARVRF EDGTTLRINY DAHNGYPYTP VGRILIERNI IPKEQMSMQR
IRQWMEENPD GAHELRRQNR SYVFFRAVDL SDKDEAVGAQ GVPLTPGRSI AVDKALHVYG
TPFFIEADLP LDSEQSATPF RRLMVAQDTG SAIVGPARAD LYFGAGAEAG RVSGRLRHGA
RFVMLLPNSL DPLARGRTMP LPEARPSAKI AKLFPQTEQP KPTVEQKPAE PPSAAPSANP
ATPSAEPAKA APSTAERASK PAAAAAAVPL PEARPATAPE IRPAHRRLHR PWRHHRRWHG
AR