Gene RPC_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0294 
Symbol 
ID3971053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp317294 
End bp318133 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID637923408 
Producthypothetical protein 
Protein accessionYP_530188 
Protein GI90421818 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCA CCGACGGCAG CTATTTTCAC CTTCATCTGG TGTCCGATTC GACCGGCGAG 
ACTCTGATCA CGGTGTCGCG CGCGGTGGCG GCGCAATACG CCAATGTCAG CCCGGTCGAA
CATGTTTATC CCTTGGTGCG CAGCCAGAAG CAGCTCGACC GGGTGTTGAC CGAGATCGAG
GAAGCTCCCG GCATCGTGCT GTTCACCCTG CTGGAAAAGG ATCTGGTGGG GCGGCTCGAG
GCGAAGTGCG AGGAAATCAA CATTCCGAGC CTGTCGATCA TCGGGCCGGT GATGCAGCTG
TTCCAGGCCT ATCTCGGCTC CTCCACGACC GGCCGGGTCG GCGCCCAGCA CACCTTGAAC
GCAGAATATT TCAAGCGCAT CGACGCGTTG AATTATTCGA TGATCCACGA CGACGGGCAG
CACGTCGAAG GCCTGGAAGA CGCCGACGTG GTGCTGGTCG GGGTGTCGCG CACCTCGAAG
ACCCCGACCT CGATCTATCT CGCCAATCGC GGCATCCGCA CCGCGAACGT GCCGCTGGTG
CCCGGCATCG CGATTCCGCA CCAGCTCGAA ACCCTGACCA AACCGCTGGT GGTCAGCCTG
CACGCCACGC CGGAGCGGCT GATCCAGGTC CGGCAGAACC GGCTGCTCTC GATGGGCGCC
ACGGTCGGCA ACGAGGATTA CATCGATCGG CAGTCGGTCA ACGACGAAGT CTCGTTCGCC
CGCAGGCTGA GCGCCAAATA CGGCTGGGCG TTGCTCGAAG TCACAAGGCG TTCGATCGAG
GAAACCGCGG CCGCGGTGAT GAAACTGTTG GCCGACCGGC AGCGGCAGCG GCAGGAATGA
 
Protein sequence
MMPTDGSYFH LHLVSDSTGE TLITVSRAVA AQYANVSPVE HVYPLVRSQK QLDRVLTEIE 
EAPGIVLFTL LEKDLVGRLE AKCEEINIPS LSIIGPVMQL FQAYLGSSTT GRVGAQHTLN
AEYFKRIDAL NYSMIHDDGQ HVEGLEDADV VLVGVSRTSK TPTSIYLANR GIRTANVPLV
PGIAIPHQLE TLTKPLVVSL HATPERLIQV RQNRLLSMGA TVGNEDYIDR QSVNDEVSFA
RRLSAKYGWA LLEVTRRSIE ETAAAVMKLL ADRQRQRQE