Gene RPC_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0291 
SymboltrmE 
ID3971050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp313243 
End bp314592 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content69% 
IMG OID637923405 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_530185 
Protein GI90421815 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGC GCCAGCAAAC CATCTTCGCA TTATCCTCGG GCCGACCGCC GGCGGCGCTG 
GCGATCGTCC GGGTGTCGGG GCCTGAGGCC GCAATCGTGC TCGAGCGAAT CGCCGGACGA
TTGCCGCCGC CGCGCCAGGC GATGCGCGCG CTGTTGCACG ACGCGAGCGC GCAGCCGATC
GACGACGCCA TCGTGCTGTG GTTTCCGGCG CCGCGGAGCG CCACCGGCGA GGACGTCGCC
GAGTTTCACA TCCATGGCGG CCGCGCGGTG CTGAGCGCGG TGATCGCGGC GATCGGCACG
AACGAAAATT TGCGCGCTGC GGAGCCCGGC GAATTCACCC GGCGGGCGTT CGAGAACGGC
AAGCTCGACC TCACCGAAGC CGAAGGGCTC GACGATCTGA TCCACGCCGA CACCGAGCGG
CAACGCCGCC AGGCGCTGCG GCAGTTGCAG GGCCTGCTCG GCGACAGAGC GCGCGACTGG
CGCGGAGAGA TCATCGCGGC GTCGGCGCTG GTGGAAGCCG CGATCGATTT TGCCGACGAG
GGCGACGTGC CGGACGAATT GATCGCGCCG GCCAAGGCCA AGATCGAAAT CCTGCTCGAC
GAGATCGAAG ACGTGCTGGC GCAGGAGGGC CGCAGCGAAA AGCTGCGCGA CGGCTTGGTG
GTGGCGATCA CCGGGCCGCC GAATGTCGGC AAGTCCACGC TGATGAACCA GCTGGCGCGG
CGCGAGGTGG CGATCGTGTC GCCGCATGCC GGCACCACGC GCGATATCAT CGAGGTGCAT
CTCGATCTCG ACGGCTATCC GGTGACGGTG ATCGACACCG CCGGGATCCG CGAGGCGATC
GACCCGGTCG AGCAGGAGGG CGTGCGCCGC GCCAGGAGCC GCGCCGCCGA GGCCGATCTG
CGGCTGTGGC TGGTGGATGC GCAGGCGGCG GGCGACGGCG AGGACGCGTT GCGGGCCTGG
ATGGCGCAGG GTCAGAACGG CTTCTGGGTG GTGCGCAACA AGGTCGACGT GGCGGGCGAG
CCGACGGGCG AGCTATCGGC CACCGGCTGG CCGTGCTTTT CGATCTCCGC GGCGAATGGC
CGCGGCGTGG CGGAATTGAT CGCGGCGCTG GGAAAATTCG CCGCGGCGCA TCTTGGCGGG
GAGTCGGCGT TGATCACCCG CGCCCGGCAC CGCGACTTGT TGCGGCAGAC CGCCGACGCG
CTGGGGAGGG CGATCGACCT GCCGGAACAG GTCGAGTTGA TCGCGGAGGA GTTGCGGATT
GCAGCGCACC GGCTCGGGCA ATTGCTCGGC CGGGTCGACG TCGAGGATAT CTTGGACGTG
ATCTTCCGGG AGTTTTGTGT CGGGAAGTAA
 
Protein sequence
MHSRQQTIFA LSSGRPPAAL AIVRVSGPEA AIVLERIAGR LPPPRQAMRA LLHDASAQPI 
DDAIVLWFPA PRSATGEDVA EFHIHGGRAV LSAVIAAIGT NENLRAAEPG EFTRRAFENG
KLDLTEAEGL DDLIHADTER QRRQALRQLQ GLLGDRARDW RGEIIAASAL VEAAIDFADE
GDVPDELIAP AKAKIEILLD EIEDVLAQEG RSEKLRDGLV VAITGPPNVG KSTLMNQLAR
REVAIVSPHA GTTRDIIEVH LDLDGYPVTV IDTAGIREAI DPVEQEGVRR ARSRAAEADL
RLWLVDAQAA GDGEDALRAW MAQGQNGFWV VRNKVDVAGE PTGELSATGW PCFSISAANG
RGVAELIAAL GKFAAAHLGG ESALITRARH RDLLRQTADA LGRAIDLPEQ VELIAEELRI
AAHRLGQLLG RVDVEDILDV IFREFCVGK