Gene RPC_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0289 
SymbolgidB 
ID3971048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp309257 
End bp309961 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637923403 
Product16S rRNA methyltransferase GidB 
Protein accessionYP_530183 
Protein GI90421813 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.919787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAC GTTCGCAGAA ATCGCCGCCG CCGCCGGAGC TTGCCGCCGA TAAGGCCGCG 
GCGCTCAGGC TCACGCCTGT TTCACGTGAA ACAGAAGCGC GGCTCGACGC CTATGTGGCG
CTGCTGCTGC AGTGGCAGGC CAAGACCAAC CTGATTTCGC CGGCGACGCT GCCGCAACTC
TGGACCCGGC ACGTCGCCGA TTCGCTGCAG CTGCTGCGGT TGGCGCCGGA CGCCAAAACC
TGGCTCGATT TCGGCAGCGG CGGCGGCTTT CCCGGCGTGG TGCTGGCCTG TGCGCTGGCC
GAGAGCGCCG GCGGGTCGGT GCAGCTGGTC GAGCGCAACG TCAAGAAGGC GGCGTTTTTG
CGCGAAGCGC TGCGCGTCAC CGGCGGCGCC GGACAAGTTA TCCTCGCGGA TATCGGGGAT
AGTGTGGATA GATTTGCCGG GCAGGTCGAT TGCGTCACCG CGCGCGCGGT GGCTCCGCTA
CACCAACTCA TCGGTTTCGC CAAACCCTTG ATCCGGCAGG GCGCCAAGGC CCTGTTCCTC
AAGGGTCAGG ATGTAGACGC GGAATTGACC GAAGCCACTA AATCTTGGAA GTTTAGCCCA
CGCCTGCATC CCAGCCTCAC CGGCGGACAG GGCTGGATCG TCGAGCTCGG CGCCGTCGAG
CCCCAGGATC AGTCCGCCCC AACACCCCAT GGCGCATCCG TATGA
 
Protein sequence
MAQRSQKSPP PPELAADKAA ALRLTPVSRE TEARLDAYVA LLLQWQAKTN LISPATLPQL 
WTRHVADSLQ LLRLAPDAKT WLDFGSGGGF PGVVLACALA ESAGGSVQLV ERNVKKAAFL
REALRVTGGA GQVILADIGD SVDRFAGQVD CVTARAVAPL HQLIGFAKPL IRQGAKALFL
KGQDVDAELT EATKSWKFSP RLHPSLTGGQ GWIVELGAVE PQDQSAPTPH GASV