| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0286 |
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| Symbol | holA |
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| ID | 3971045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 305856 |
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| End bp | 306884 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923400 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_530180 |
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| Protein GI | 90421810 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGCGC TGCGCGGACG AGAAGTCGAT AGTTTTCTCG CCCGGCCGGA TTCCGGCCGC
CCGATCATTC TGTTGTACGG CCCCGACGCC GGCCTGGTGC GCGAGCGCGC CGAGGCGCTG
ATTGCGTCGG CGGTCGACGA TCCCTCCGAT CCGTTCTCCA CCGTGCGATT GGACGGCGAC
GAGCTCGCCG CCGAGCCGTC GCGGCTGGTC GACGAGGCGA TGACGATTCC GATGTTCGGC
GGCCGTCGCG CGATCAGGGT GCGCGCCGGC TCGAAGAATT TCGTCAGCGG CGTCGAGACG
CTGGCCCTCT CCGCGCTGAA GGATTGCCGG ATCGTGATCG AGGCCGGCGA CCTCAAGCCC
GACGCGGCGC TGCGCAAGGC CTGCGAGCGC GCCAAGACCG CGGTGGCGAT CGGCTGCTAC
ACCGACGGCG AGCGCGATCT TGCCAAACTG GTCGACGACG AATTCCGCAA CGCCAATCTG
CGCATCGCGC CCGACGTCCG CGCGCTGCTG GTGTCGCTGC TCGGCGGCGA CCGCCAGGCC
TCGCGCAACG AAGTCCGCAA GCTGGTGCTG TACACCCACG GCCAAAGCGA GGTGACGCTC
GACGACGTCA TGGCGGTGGT GGCGGACGCC TCCGAATTGA AGCTCGATCC GGTGATCGAC
GGCGCCTTCG CGGGCAAGCC GTCGCTGGTG GAAACCGAAT TCACCAAGGC GATGAACGCC
GGCTCCAATC CCGGCACCAT CATGATGGCG GCGCAACGCC ACGCCGCCTT GATGCACAAG
GCCGCGCTCG CGGTCGACGC CGGCAGTTCG GAATCCTCCG CCGTCGAGGG CGGCTTTCCG
CGGTTGCATT TTTCCAGAAA GGCGATCGTC GAAGCGGGGT TGCGCAATTT CACCGCGCAG
CGGCTGCTGG CGATCATCGA TCAGCTCGGC AACGCAGCGC TGGAGATGCG CAAGCAATCC
GCACTCGCCC CGGTGATCGC GCAGCGCGCG CTGCTGGCGA TCGCGGTCAA TGCAAGGCGG
CGGGGCTAA
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| Protein sequence | MVALRGREVD SFLARPDSGR PIILLYGPDA GLVRERAEAL IASAVDDPSD PFSTVRLDGD
ELAAEPSRLV DEAMTIPMFG GRRAIRVRAG SKNFVSGVET LALSALKDCR IVIEAGDLKP
DAALRKACER AKTAVAIGCY TDGERDLAKL VDDEFRNANL RIAPDVRALL VSLLGGDRQA
SRNEVRKLVL YTHGQSEVTL DDVMAVVADA SELKLDPVID GAFAGKPSLV ETEFTKAMNA
GSNPGTIMMA AQRHAALMHK AALAVDAGSS ESSAVEGGFP RLHFSRKAIV EAGLRNFTAQ
RLLAIIDQLG NAALEMRKQS ALAPVIAQRA LLAIAVNARR RG
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