| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0285 |
|---|
| Symbol | |
|---|
| ID | 3971044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 305303 |
|---|
| End bp | 305854 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923399 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530179 |
|---|
| Protein GI | 90421809 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5468] Predicted secreted (periplasmic) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.68713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTGGG CTAGTCCCCG CCTTGCCGCC CGACTGATCG TCGTGGTCGC ATTGGCCGCG
CTGACCGCCG GTTGTTTTCA ACCGATGTAT GCCGAGCGCA GCGACGGCAC GCCGGGCCTG
CGCGACAAGC TCGCCAGCGT CGAGGTTCCG GCGATCGACG CGCCGAACGG CTCGCGGGTG
GCGCGGCTCG GCGTCGAGAT CCGCAATGCG CTGATGTTCA AGATGTACGG CAACGCCACC
GGCATGCCGC CGACGCATCG GTTGGAGATC AGGCTCACCA CCTCGCGCTC CTCGCTGATC
GTCGATCCTT CGACCGCGCT GCCGGCGATC GAGAACTACG GCATCGATGC CAGCTACGTG
TTGAAAGACA GCGCCACCGA CAAGGTGATC CTGACCGGCA GCACGTTCTC GCGAGTGTCG
TACGACGTCC CCGGCCAGAC CCAGCGCTTC GCCCGGCAAC GCGCGTTCCG CGACGCCGAG
GATCGCGCCT CACAGGAAAT CGCCGAGAAT ATCCAGACCC GGCTGGCGTC GTTCTTCTCC
GCCGGCATCT GA
|
|---|
| Protein sequence | MSWASPRLAA RLIVVVALAA LTAGCFQPMY AERSDGTPGL RDKLASVEVP AIDAPNGSRV
ARLGVEIRNA LMFKMYGNAT GMPPTHRLEI RLTTSRSSLI VDPSTALPAI ENYGIDASYV
LKDSATDKVI LTGSTFSRVS YDVPGQTQRF ARQRAFRDAE DRASQEIAEN IQTRLASFFS
AGI
|
|---|
| |