| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0272 |
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| Symbol | |
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| ID | 3971106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 289167 |
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| End bp | 290609 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923386 |
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| Product | ammonium transporter |
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| Protein accession | YP_530166 |
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| Protein GI | 90421796 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.352116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTA AACGTCCCTA CAGTGCGGGA CTGGCTGCGC TTGCCGTCGG CATGTTTGCC
GCGACCGCAG CCTATGCCGA GCCCACCGTG AACAAAGGCG ACAACGCCTG GCTGATGACC
TCGACAGTGC TGGTGCTGTT GATGACGATC CCCGGCCTGG CGCTGTTCTA CGGCGGCATG
GTGCGTTCCA AGAACATGCT CTCGGTGCTG ATGCAGGTGT TCTACACCGT CTGTATCGCG
ATCATCCTGT GGGCACTGTA CGGCTACAGC CTGGCCTTCA CCGGCGGCTC CGATTTCATC
GGCGGCTTCT CCAAGGCGTT CCTCGCCGGC GTGACCACCG ATTCGAAAGC CGCGACCTTC
AGCGTCGACG CCAACGTCTC GGAACTGGTC TATGTCTGCT TCCAGATGAC CTTCGCGGCG
ATCACCCCGG CGCTGATCGT CGGCGCCTTC GCCGAACGCA CCCGCTTCGC CGCGGTGGCG
CTGTTCATCC CGTTGTGGCT CACCCTGATC TACTTCCCGA TCGCCCACAT GGTTTGGTAT
TGGGCCGGCC CGGACGCCAT CGACGCCGCC GCCAAGGCGC TCGCCGCTGC GACCGACGAC
GCCAGCAAGG CCACCGCGCA GGCCGCACTT GACGCCGTCA ATGCCGACGC CGGCTGGGTG
TTCAAGAAGG GCGCCATCGA CTTCGCCGGC GGCACCGTGG TGCACATCAA CGCCGGCATC
GCCGGTCTGA TGGGCGCGAT CCTGATCGGC AAGCGCACCG GCTACGGCAA GGAATTGATG
TCGCCGCATT CGCTGACGAT GTCGATGATC GGCGCCTCGC TGCTGTGGGT GGGCTGGTTC
GGCTTCAACG CCGGCTCCAA CCTGGAAGCC ACCGGCGGCG CCGGCCTCGC CATGACCAAC
TCGTTCGTCG CCACCGCGGC CGCGGCGTTG TCCTGGATGT TCGCGGAGTG GATGATCAAG
GGCCACCCCT CGGTGCTCGG TGCGATCTCC GGCGCGGTCG CCGGTCTGGT TGCGGTGACG
CCCGCGGCCG GCTTCTCCGG TCCGATGGGC GCCATCGTGC TCGGCCTGGT GGTCGGCGTG
GTCTGCCTGT TCTTCTGCAC CGTGGTGAAG AACGCGCTCG GCTATGACGA CTCGCTCGAC
GTGTTCGGCG TGCACTGCAT CGGCGGCATC GTCGGCGCGC TCGGCACCGG CATCCTGGTC
AACCCGGCGC TCGGCGGCAC CGGCATCATG GACTACGCAG CCGGCAAGAT CGCCGACTAC
GACATGGTGG CGCAGCTGAC CGCGCAGAGC TGGGGCGTCG GCACCACGCT GGTGTGGTCC
GGCATCGGCT CGGCGATCCT CTACAAGGTC GTCGACGTGA TCGTCGGCCT GCGCGCCACC
GTCGAGGTGG AACGCGAGGG TCTCGACGTC GTCGAGCACA CTGAGCGCGC TTACAACATG
TAA
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| Protein sequence | MTFKRPYSAG LAALAVGMFA ATAAYAEPTV NKGDNAWLMT STVLVLLMTI PGLALFYGGM
VRSKNMLSVL MQVFYTVCIA IILWALYGYS LAFTGGSDFI GGFSKAFLAG VTTDSKAATF
SVDANVSELV YVCFQMTFAA ITPALIVGAF AERTRFAAVA LFIPLWLTLI YFPIAHMVWY
WAGPDAIDAA AKALAAATDD ASKATAQAAL DAVNADAGWV FKKGAIDFAG GTVVHINAGI
AGLMGAILIG KRTGYGKELM SPHSLTMSMI GASLLWVGWF GFNAGSNLEA TGGAGLAMTN
SFVATAAAAL SWMFAEWMIK GHPSVLGAIS GAVAGLVAVT PAAGFSGPMG AIVLGLVVGV
VCLFFCTVVK NALGYDDSLD VFGVHCIGGI VGALGTGILV NPALGGTGIM DYAAGKIADY
DMVAQLTAQS WGVGTTLVWS GIGSAILYKV VDVIVGLRAT VEVEREGLDV VEHTERAYNM
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