| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0270 |
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| Symbol | |
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| ID | 3971104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 287101 |
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| End bp | 288402 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923384 |
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| Product | ammonium transporter |
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| Protein accession | YP_530164 |
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| Protein GI | 90421794 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.3359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA TCCGTCGCGC AGCGCGTCTC GCGCTGGCCG CTTGCTTTGC GGCAAGCAGT
TTTTCCACCG CGGCGTTGGC CGAGGACAGC ACTATCAACG GCGCCGACAC CGCCTGGATG
ATCGTCGCCA CCGCGCTGGT GCTGATGATG ACCATCCCGG GCCTGGCGCT GTTCTACTCC
GGCATGGTGC GGAAGAAGAA CGTGCTCGCC ACCATGGCGC AGAGCCTGGC CGCGGTGGCG
CTGATCTCGA TCCTGTGGGT GGCGTTCGGC TATTCGCTGG CGTTCACCGG CGACGGCGCG
CTGATCGGCT CGTTCGACCG GCTGTTTCTT TCCGGCATGA CCATGGAGGG CGTCAACCCG
CTCGCCAAGA CCATCCCCGA AGCGCTGTTC ATGCTCTACC AGATGACGTT CGCGATCATC
ACGGTGGCGC TGGTGGCGGG ATCGGTGGCC GACCGGATGC GGTTCTCGGC CTATCTGGTG
TTCTCGATCG GCTGGTTCGT GGTGGTCTAT GTGCCGCTGA CGCATTGGGT GTGGGGCGGC
GGTTTCCTCG GCTCCGCGGG CGTGCTGGAT TTCGCCGGCG GTCTCGTGGT GCATCTGTCG
GCGGGCATCG GCGGGCTGGT CGCAGCCTTG GTGATCGGCC GCCGGCAAGG CTACGGCGCC
GACAATCTGT CGCCGTTCGA CCTGTCGCTG GCGGTGATGG GCACCGGGCT GTTGTGGGTC
GGCTGGTTCG GCTTCAACGG CGGCTCGGCG CTCGGCGCCA ATGCCCACGC CGTGATGGCG
ATCACCGCCA CCCATCTGTC GGCTTGCGCC GGCGCTCTCG CCTGGGGCGC GATCGAATGG
ATCACCCGGC GCAAGCCCTC CGTGCTGGGC ATGATTTCGG GCGCGGTCGC CGGGCTTGGC
ACCATTACGC CGGCGTCGGG CTTCGTCGCG CCTTGGCATG GCATCGTGAT CGGCCTGATC
GCCGGCACGG TGTGTTTCTG GGCCTGCACC AGCCTCAAGC AACGGTTCGG CTATGACGAT
TCGCTGGACG TGTTCGGCGT CCACGGCGTC GGCGGCCTGG TCGGCACCCT GCTCGGCGGG
GTGTTCGCCA CCGCGGCGAT CGGCGGCACC GCCGGCCTGA TCGAAGGCCA TTGGATGCAG
CCGCTGATCC AGCTCTACGG CATCGCCGTC ACCCTGCTGT GGTCGGGCGC GGCCACCTTC
GGACTGCTGA TGCTGGTCAG GCTGATGGTG CCGCTGCGGG TGTCGCGCGA GCACGAGCGC
GAGGGCCTGG ACATTTCGCA GCACGGCGAG GCGCTGCAGT AG
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| Protein sequence | MASIRRAARL ALAACFAASS FSTAALAEDS TINGADTAWM IVATALVLMM TIPGLALFYS
GMVRKKNVLA TMAQSLAAVA LISILWVAFG YSLAFTGDGA LIGSFDRLFL SGMTMEGVNP
LAKTIPEALF MLYQMTFAII TVALVAGSVA DRMRFSAYLV FSIGWFVVVY VPLTHWVWGG
GFLGSAGVLD FAGGLVVHLS AGIGGLVAAL VIGRRQGYGA DNLSPFDLSL AVMGTGLLWV
GWFGFNGGSA LGANAHAVMA ITATHLSACA GALAWGAIEW ITRRKPSVLG MISGAVAGLG
TITPASGFVA PWHGIVIGLI AGTVCFWACT SLKQRFGYDD SLDVFGVHGV GGLVGTLLGG
VFATAAIGGT AGLIEGHWMQ PLIQLYGIAV TLLWSGAATF GLLMLVRLMV PLRVSREHER
EGLDISQHGE ALQ
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