Gene RPC_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0267 
Symbol 
ID3971101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp284271 
End bp285491 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID637923381 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_530161 
Protein GI90421791 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.192574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.370598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC AGCGCGGCAT TGTCATCGGA GGCGGCGCGT TCGCCGGACT GGCGCTGGCC 
CTGGCGTTGC GCCAGGGGCT CGGCCCCGAC GTTCCGGTGA TCGTCGCCGA TCCGGCGCTT
TCGCTGCGGC CGTCGCGCGA TCCGCGTGCC ACCGCGATCG TCGCCGCCTG CCGCCGGCTG
TTCGACACGC TCGGCGTGTG GCAGGCGGTG GCGCCGCATG CGCAGCCGAT CCTCGACATG
GTGGTGACGG ATTCCGCGCT GGAAGACGCC ACCCGGCCGG TGTTCCTGAC CTTCGCCGGC
CAGATCGAGC CCGGCGAGCC GTTCGCCCAT ATGGTGGAAA ACCGCCATCT GATCGACGCC
TTGGCCGAGC GCGCCGAGGC CGCCGGCGTC GAACTGCGCG CCACCGCGGT GACGGGTTAC
GAATCCCGGC TGGAGGCCAC CAGCGTGACG CTCGGCGATG GCAGCGTGAT CGACGCCGCG
CTGCTGGTCG CCGCCGACGG CGCCCGTTCC AAGCTGCGCG AGCGCGCCGG CATCAGCACC
TATGGCTGGG ATTACGACCA GGCCGGCATC GTGGTCACCG TCGAACATGA GCGCGACCAC
AACGGCTGCG CCGAAGAGCA TTTCCTCCCC GCCGGGCCGT TCGCAATCCT GCCGCTCGTC
GGCAAGCGCT CCTCGCTGGT GTGGACCGAG AGCCGCGCCG AAGCCGCGCG GATCGTCGCG
CTGTCCGACG CCGAGTTTCA TCGCGAGCTG GAACAGCGGT TCGGGCTGCG GCTCGGCGAG
GTCAAGGCGC TGGACAAGCC GAAATCGTTT CCGCTCGGCT ATTTCGTTGC GCAATCCTTC
ATCGGCGAGC GGCTGGCGCT GATCGGCGAC GCCGCCCATG TGATCCACCC GATCGCCGGG
CAAGGCCTCA ATATGGGGCT GAAGGACGTC GCAGCCTTGG CCGAGGTGAT CGTCGACGCG
GCGCGGCTCG GCATCGATTT CGGCCAGGCC GACGTGCTCG ATCGCTACCA GGTGTGGCGG
CGGTTCGACA CCATGGCGAT GGGGGTGGCG ACCAATTCGC TGAACCTGTT GTTCTCCAAC
AAGTCGACGC TGCTGCGCAG CGTCCGCGAC ATCGGGCTCG GCGTGGTCGA CCGGCTGCCG
CCGCTCAAGG AACTGTTCAT CCGCCAGGCC GCCGGCCTCG GCGGCGAAGT GCCGCGGCTG
TTGAAGGGCG AGGCGCTGTA A
 
Protein sequence
MTAQRGIVIG GGAFAGLALA LALRQGLGPD VPVIVADPAL SLRPSRDPRA TAIVAACRRL 
FDTLGVWQAV APHAQPILDM VVTDSALEDA TRPVFLTFAG QIEPGEPFAH MVENRHLIDA
LAERAEAAGV ELRATAVTGY ESRLEATSVT LGDGSVIDAA LLVAADGARS KLRERAGIST
YGWDYDQAGI VVTVEHERDH NGCAEEHFLP AGPFAILPLV GKRSSLVWTE SRAEAARIVA
LSDAEFHREL EQRFGLRLGE VKALDKPKSF PLGYFVAQSF IGERLALIGD AAHVIHPIAG
QGLNMGLKDV AALAEVIVDA ARLGIDFGQA DVLDRYQVWR RFDTMAMGVA TNSLNLLFSN
KSTLLRSVRD IGLGVVDRLP PLKELFIRQA AGLGGEVPRL LKGEAL