| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0262 |
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| Symbol | |
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| ID | 3971133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 278633 |
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| End bp | 279703 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923375 |
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| Product | AppA/PpaA family photosynthesis gene regulator |
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| Protein accession | YP_530156 |
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| Protein GI | 90421786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.551599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG CGGTCGCGGT GCCATCGCTT TGGCGGTATC AATATACGCC GCGCGTAGTC
CGGCCGTTGC AAAATTTACC GCACCGCAGC CGACGGTTTG ATCCAGAGCA AAGACTCCTC
GCGCGATTGG CGTTTCCTTG CCCTACTGCC CCGCAAACTG AAAACTTCGC TACGGCTTTC
TTGAGGCGGA ACCGGATGAT CGTCGCTGAT CACCCTCCGA TAGCCTTGAT ACCGACGCAC
CCGACGCATG TCCCCCTTGA CCAAGGGCAA CCTGATCGTG CTGGCATCGT GAATATCGAA
AACATCGTTC CGACCATCAT CCCGCGGCTG TTCGTCAAGC CATCGGCAGC GCGGCTGGCG
GCGTCCAGAG AAACCAACCC GCGCGCCGCC GAACTGGCGC GGCTGCTGCT CTCGCCGCAG
CCCGACGACG CCCTGGCTTT GCTCGATCAG AGCTTCGCCC TGGAAAAATC GCCGAGCCAG
CTGTTCACCT CGCTGTTCGA ACCGGCCGCG CGTTGCCTCG GCGATCTGTG GAGCGCCGAT
CATTGCAGCG AATTCGAAGT GACGATCGCG CTGTGCCATC TGCAGAGCGC GATGCGGCGC
ATCAGCTTCG ATCGGATGGC GCCTCCGGTG GCCAACGCCG CGCAACGCGC CGTATTGGTG
GTGCCGCAAC CCGGCGAGCC GCATCTGTTC TGCGCGGCGC TGAACGCCGA ATTGCTGCGG
CAGGCCGGTT GGGCCGCCAC CTGCGAGTTT CCGGACTCCG ATCAGGCGCT GAAGCAATTG
GTCGCCCAGA GCTGGTTCGA CGCCATCGAT CTGTCGCTCA GTCCGGCCTT GCGCCGCGAA
CATTGGCTGC CGCGGCTGAC CGAAACCGTG CGGCAGGCCC GCCGGGCCTC GCGCAATCCG
GCGATCACCA TCATCGTCAG CGGGCGGGTG TTCGCCGAGC GTCCCGAGAT CGGCGAACAG
GTCGGCGCCG ATGCGGCATG CGAGTCCGCC GTGCAGATCG AACAATTGAT CCAACGCCTG
TTGCTGGCGC GCTATGCGTC GCGGCGTCCG GCAAATCTGG CCTGGATCTG A
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| Protein sequence | MDRAVAVPSL WRYQYTPRVV RPLQNLPHRS RRFDPEQRLL ARLAFPCPTA PQTENFATAF
LRRNRMIVAD HPPIALIPTH PTHVPLDQGQ PDRAGIVNIE NIVPTIIPRL FVKPSAARLA
ASRETNPRAA ELARLLLSPQ PDDALALLDQ SFALEKSPSQ LFTSLFEPAA RCLGDLWSAD
HCSEFEVTIA LCHLQSAMRR ISFDRMAPPV ANAAQRAVLV VPQPGEPHLF CAALNAELLR
QAGWAATCEF PDSDQALKQL VAQSWFDAID LSLSPALRRE HWLPRLTETV RQARRASRNP
AITIIVSGRV FAERPEIGEQ VGADAACESA VQIEQLIQRL LLARYASRRP ANLAWI
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