Gene RPC_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0260 
Symbol 
ID3971131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp275668 
End bp276921 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID637923373 
Productmolecular chaperone, Hsp70 class 
Protein accessionYP_530154 
Protein GI90421784 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.547312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGT GCGGACTTGA CTTTGGAACG TCGAACACGA CGCTCGGCAC CATGATCGAC 
CAGGTTCCGG TGCTCTGCGC GCTGGAAGCC GACCACACCA CGATTCCGAG CGCGATCTTC
TATGGCAGCG ACCGCAGCGT GCTGATCGGA CGCCGCGCGA TCGACGCCTA TGTGGAGGGC
ACGCACGGCC GGCTGATGCG CAGCCTGAAG TCCGTGCTCG GCACTTCGCT GATCGACGAG
ACCACCATGG TGGGCCGGCA GCGCCGCAGT TTCCGCGACG TCATCGGCTA CTATCTCGGC
GCGGTGAAGC GGCGCGCCGA ACAGGCCACC GGCCGCAATC TGCGCAACCT GGTGCACGGC
CGCCCGGTGC ATTTCGTCGA CAATTCGCCC GACGCCGATC GCCGCGCCGA GGCCACCTTG
CGCGACATCG CCCGCGAACT CGGCTTCGAC GACGTCACCT TCCAGTTCGA ACCGATCGCC
GCGGCGCTGG ATTACGAACG CCAGGTGACG GGCGAACAGA TCGCGCTGAT CGCCGACATC
GGCGGCGGCA CCTCGGATTT TTCGATCGTG CGACTGAGCC CGCAGCGCCA CCTGAAGACC
GACCGCAAGG CGGACATTCT GGCCAATGAT GGCGTGCGGA TCGGCGGCAC CGATTTCGAT
CGCCAGCTGT CGCTCGGCGT GATCATGCCG CTGTTCGGCT ATCGCAGCCC GATGCTGCGC
GCCGGGCTCG ACGTGCCGTC GCGCTATTTT CACGAGCTGT CGACCTGGTC CGACATCAAC
AAGATGTACG ATCCGAAGGT GCTGACCGAA CTGCGGCAGA TCCGCCGCGA GGCCAAACAG
CCGGAGCTGC TGGATCGGCT GATGCGGGTG GTCGACGAGC AGCGCGGCCA TACTTTGGCG
ATGGAGGTCG AGGCCGCCAA GATCGCGTTA GCGGGCGCGA CGCAGGCCGA AATTCCGCTG
CAATGGGTCG AGCCGGATCT CAATGTCGCA ATCGGCCGGC CGCAGCTGGT GCAGCACACA
AGATTGCTGG CGGAGCGGAT CGCCTCGCGG ATCAAGCTGT GCCTATCGCA CGCGCAGCTC
GATGCGAGCG CGATCGACGC GGTGTTCCTC ACCGGCGGCT CGGTGCGGCT CGCCCATGTC
CGCAAGGCGA TGACCAAGGT GCTGCCGGAC GCCCGCATCG TCGAGGGCGA CACCTTCGGC
GCGGTCGGCA AGGGGCTGAC CATCGAGGCG GGGCGGCGCT ACGGGCCGGG TTAG
 
Protein sequence
MSACGLDFGT SNTTLGTMID QVPVLCALEA DHTTIPSAIF YGSDRSVLIG RRAIDAYVEG 
THGRLMRSLK SVLGTSLIDE TTMVGRQRRS FRDVIGYYLG AVKRRAEQAT GRNLRNLVHG
RPVHFVDNSP DADRRAEATL RDIARELGFD DVTFQFEPIA AALDYERQVT GEQIALIADI
GGGTSDFSIV RLSPQRHLKT DRKADILAND GVRIGGTDFD RQLSLGVIMP LFGYRSPMLR
AGLDVPSRYF HELSTWSDIN KMYDPKVLTE LRQIRREAKQ PELLDRLMRV VDEQRGHTLA
MEVEAAKIAL AGATQAEIPL QWVEPDLNVA IGRPQLVQHT RLLAERIASR IKLCLSHAQL
DASAIDAVFL TGGSVRLAHV RKAMTKVLPD ARIVEGDTFG AVGKGLTIEA GRRYGPG