| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0247 |
|---|
| Symbol | |
|---|
| ID | 3971118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 261277 |
|---|
| End bp | 261909 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637923360 |
|---|
| Product | YVTN beta-propeller repeat-containing protein |
|---|
| Protein accession | YP_530141 |
|---|
| Protein GI | 90421771 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0645114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAG CGATGGCCGC GGCGCTGCTG CTCTGTGCGC TGGCCACACG CTGGGCGTCG
ATCGCCCGGA AACCAAATGC AAGCTGCAGT AAGGACGGGC TGGCGATGAG AAACGGGTCG
CGCAATTCGA AGCTCGTGTC CCGGGCGCGG CGCAGCGCGA AGCGCTGCTC CGCAGACCCG
GGACCGTTCC AAGCGCTGCG GTCCGTAACA GCCCCGGCTC TGCAGCGCAC CACGCCGCAA
GAGCGACGCG CTGCGCTGCG TCCGGGGCAC GATTGCATTG CCGAAGGCGG TCATCGGATC
GAAGCCGGAC GCGCAATGAC TCGCGGAGTC ATCGTCGCAG CCGCCCTGCT CTCGCTCATT
GCCGCGACGC CCGCCGCGGC TTCCATCGCC TATATCTCCA ACGAAGAGAG CAACACCGTC
TCGGTGATCG ACACCAATAT TTGGTCAGTG ACCGCCACCA TCAAGGTCGG GCAGCGGCCG
CGCGGCATCG AATTCACCCG CGACGGCAAA TTCGTGCTGG TCGCGGTCGG CGATGACGAC
ACCATCGAGC TGATCGACGT CGCCGCGCAA AAGGTCTTCA AAACCATCCA GGTCGGTGAA
TTGCCCTGGG GCATCACCGT CGCGCCGAAA TGA
|
|---|
| Protein sequence | MIRAMAAALL LCALATRWAS IARKPNASCS KDGLAMRNGS RNSKLVSRAR RSAKRCSADP
GPFQALRSVT APALQRTTPQ ERRAALRPGH DCIAEGGHRI EAGRAMTRGV IVAAALLSLI
AATPAAASIA YISNEESNTV SVIDTNIWSV TATIKVGQRP RGIEFTRDGK FVLVAVGDDD
TIELIDVAAQ KVFKTIQVGE LPWGITVAPK
|
|---|
| |