Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0244 |
Symbol | |
ID | 3971154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 257538 |
End bp | 258125 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637923357 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_530138 |
Protein GI | 90421768 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.263365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0636307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC GCATTGCCTT GCTGTCCGCC GCCGCCTTTG GCGCGCTCGC ACTCAGCGCC AGCGTCATCG CGCCCGCCAG CGCCGAAGAC AAGAAGATGA TGAAGAGCGA AATGAGCGGC GAGAAGACCG TGATGGTCGG CGGCGCCGCC ATGTTCCCCT CGAAGAACAT CGTCCAGAAC GCGGTCAATT CCAAGGATCA CACCACGCTG GTCGCCGCGG TGAAGGCCGC CGGCCTGGTC GAGACGTTGG AAAGCAAGGG ACCGTTCACC GTGTTCGCGC CGACCAACGC GGCGTTCGCC AAGCTTCCCG CCGGCACCGT GGACAATCTG ATCAAGCCGG CGAACAAGGC GACGCTGAGC AAGATCCTGA CCTATCACGT GGTACCCGGG AAGCTGGAAG CCGCCGATCT CACCGACGGC AAGAAGCTGA CCACGGTGGA AGGCGAAACC CTGACGGTGA AGGCCGCCGG CGGCAAGGTG ATGCTGACCG ACGCCAAGGG CGGAACCTCG ACGGTGACGA TCGCCAACGT CAACCAGTCG AACGGCGTGA TCCACGTCGT CGACACCGTG CTGATGCCCG CGTCGTAA
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Protein sequence | MSKRIALLSA AAFGALALSA SVIAPASAED KKMMKSEMSG EKTVMVGGAA MFPSKNIVQN AVNSKDHTTL VAAVKAAGLV ETLESKGPFT VFAPTNAAFA KLPAGTVDNL IKPANKATLS KILTYHVVPG KLEAADLTDG KKLTTVEGET LTVKAAGGKV MLTDAKGGTS TVTIANVNQS NGVIHVVDTV LMPAS
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