Gene RPC_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0244 
Symbol 
ID3971154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp257538 
End bp258125 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID637923357 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_530138 
Protein GI90421768 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.263365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0636307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC GCATTGCCTT GCTGTCCGCC GCCGCCTTTG GCGCGCTCGC ACTCAGCGCC 
AGCGTCATCG CGCCCGCCAG CGCCGAAGAC AAGAAGATGA TGAAGAGCGA AATGAGCGGC
GAGAAGACCG TGATGGTCGG CGGCGCCGCC ATGTTCCCCT CGAAGAACAT CGTCCAGAAC
GCGGTCAATT CCAAGGATCA CACCACGCTG GTCGCCGCGG TGAAGGCCGC CGGCCTGGTC
GAGACGTTGG AAAGCAAGGG ACCGTTCACC GTGTTCGCGC CGACCAACGC GGCGTTCGCC
AAGCTTCCCG CCGGCACCGT GGACAATCTG ATCAAGCCGG CGAACAAGGC GACGCTGAGC
AAGATCCTGA CCTATCACGT GGTACCCGGG AAGCTGGAAG CCGCCGATCT CACCGACGGC
AAGAAGCTGA CCACGGTGGA AGGCGAAACC CTGACGGTGA AGGCCGCCGG CGGCAAGGTG
ATGCTGACCG ACGCCAAGGG CGGAACCTCG ACGGTGACGA TCGCCAACGT CAACCAGTCG
AACGGCGTGA TCCACGTCGT CGACACCGTG CTGATGCCCG CGTCGTAA
 
Protein sequence
MSKRIALLSA AAFGALALSA SVIAPASAED KKMMKSEMSG EKTVMVGGAA MFPSKNIVQN 
AVNSKDHTTL VAAVKAAGLV ETLESKGPFT VFAPTNAAFA KLPAGTVDNL IKPANKATLS
KILTYHVVPG KLEAADLTDG KKLTTVEGET LTVKAAGGKV MLTDAKGGTS TVTIANVNQS
NGVIHVVDTV LMPAS