| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0241 |
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| Symbol | |
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| ID | 3971151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 254591 |
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| End bp | 255772 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637923354 |
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| Product | major facilitator transporter |
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| Protein accession | YP_530135 |
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| Protein GI | 90421765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.616236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0363881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCTGA TCGATCGCAC CACGGCCCAG CCGCGCCCCG CCCAGCTCAT CCTGATGCTG
GCGCTGTCGC CGACCATCAG CCTCGGCATC GGTCGTTTCG CCTATTCGCT GGTGCTGCCC
GACATGCGCG ACGCGCTCGG CTGGTCGTAT TCCGCCGCGG GATTCATGAA CACCGTCAAT
GCCGCGGGCT ATCTCGGCGG CGCGCTGGTG GCCGCCTCCC TGGTCAAGCG GTTCGGCCTG
TTCCGGGTGG TGCAGGCCGG CACGCTGGCC TGCGTCGCCT CGCTGGTATT GTGCGGGCTG
TCGGGCAATT TCGCGCTGCT CGGACTGGCG CGGCTGGTGG CGGGACTGGG GGCCGCGGTC
TCCTTCGTCG CCGGCGGCGC GCTGGCGGCG ACGCTGGCGC AGACCGAGCC TTCGCGCTCG
AGTTTCCTGC TCAGCCTGTT CTATGCCGGC CCCGGGCTCG GCATCCTGCT GTCGGGGCTG
CTGGCGCCGT TGCTGCTCGA TCGGCTCGGG CCGGGATCGT GGTGGGCGGT CTGGCTGGTG
CTGGCGCTGC TGGCGGGAGC GCTGACCTTG CCGCTGGTGC TGCGGCCGAT CGAGGCGCGC
GCGGCGCTGT CCGCGGCCAA GCCGGCGCCA TTCACGATCC GCCCGGTGGC GATCTATCTG
ATCAGCTACT TTCTGTTCGG CGCCGGCTAC ATCGCCTACA TGACCTTCAT GATCGCCTAT
GTGCGCGACG CCGGCGGCGG CGCGCTGGCG CAGAGCGGGT TCTGGTGCCT GATCGGCGCC
GGCGCGTTCG CCTCGCCCTG GGTGTGGCGG CGGCTGATCG CGCGCGGCAA GAGCGGCGTC
ACCACGGCGA TCATCCTCGG CGTCAACGCG CTCGGCGCGG CGCTGCCGCT GCTGTCGCCG
TCGCCCTGGA TGCTGGCGGT GTCGGCCGCG GTGTTCGGGG TGGCGTTCTT CGCGGTGGTC
ACCACCACTA CGGCGTTCGT GCGCTTCAAC TATCCGCCCG AAGCGTGGCC GAGCGCGATC
GCGGCGATGA CCATCGTGTT CGGGATCGGC CAGACCATCG GCCCGATCGC CACCGGCGCC
ATCACCGACG CGATGGGCAG CCTCAGCTCC GCGCTCAACG TCTCCGCCGC GGCGCTGGCA
CTGGGCGCCG TGCTGGCGGC GTTTCAGCGG CCGGTGGGGT GA
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| Protein sequence | MTLIDRTTAQ PRPAQLILML ALSPTISLGI GRFAYSLVLP DMRDALGWSY SAAGFMNTVN
AAGYLGGALV AASLVKRFGL FRVVQAGTLA CVASLVLCGL SGNFALLGLA RLVAGLGAAV
SFVAGGALAA TLAQTEPSRS SFLLSLFYAG PGLGILLSGL LAPLLLDRLG PGSWWAVWLV
LALLAGALTL PLVLRPIEAR AALSAAKPAP FTIRPVAIYL ISYFLFGAGY IAYMTFMIAY
VRDAGGGALA QSGFWCLIGA GAFASPWVWR RLIARGKSGV TTAIILGVNA LGAALPLLSP
SPWMLAVSAA VFGVAFFAVV TTTTAFVRFN YPPEAWPSAI AAMTIVFGIG QTIGPIATGA
ITDAMGSLSS ALNVSAAALA LGAVLAAFQR PVG
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