| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0240 |
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| Symbol | |
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| ID | 3971150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 253250 |
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| End bp | 254386 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923353 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_530134 |
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| Protein GI | 90421764 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.198337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0381152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATC TCGAGGAATT GACCATGGCG ACCCACAAAC TGCTGCTTCT TCCCGGCGAC
GGCATCGGCA CCGAAGTGAT GGCGGAGGTG AAGCGGCTGA TCGATTGGCT CAACGCCCAG
GGCATCGCGC ATTTCGAAAC CGAAGACGGG CTGGTCGGCG GCGCCGCTTA CGACGCCGAC
AAGGTGGCGA TCACCGACGC CACCATGGCC AAGGCGCAGG CCTCCGACGC GGTGATCTTC
GGCGCGGTCG GCGGCGCGAA ATGGGACGGC GTGCCCTATG AGGCGCGCCC GGAAGCCGGC
CTGCTGCGGC TGCGCAAAGA CCTCGGGCTG TTCGCCAATC TGCGCCCCGC GGTATGCTAC
CCGGCGCTGG CGGATTCTTC GAGCCTGAAG CGCGAGGTGG TCGAAGGCCT CGACATCATG
ATCGTGCGCG AACTCACCGG TGGGGTGTAT TTCGGCGAGC CGAAGACCAT CACCGACCTC
GGCAACGGCC AGAAGCGCGC CATCGATACG CAAGTCTACG ACAGCTACGA GATTGACCGC
ATCGCTCGTG TTGCGTTCGA CCTTGCGCGC AAGCGCCGCA ACAAGGTGAC GTCGATGGAA
AAGCGCAACG TCATGAAGTC CGGGGTGTTG TGGAACGAGG TGGTCACCCG AGTGCACGCC
GAGGACTACA AGGACGTGCA GCTCGAGCAT CAGCTGGCGG ATTCCGGCGG CATGAACCTG
GTGAAATGGC CGAAGCAGTT CGACGTCATC GTCACCGACA ACCTGTTCGG CGACATCCTC
AGCGACATCG CCGCGATGCT GACCGGCTCG CTCGGCATGC TGCCGTCGGC CTCGCTCGGC
GCGGTCGACG CCAACACCGG CAAGCGCAAG TCGATGTACG AGCCGGTGCA CGGCTCGGCC
CCCGACATCG CCGGCAAGGG CTTGGCCAAT CCGGTGGCGA TGCTGGCGTC GTTCGGCATG
GCGCTGCGCT ATTCGCTCGA CATGGGCGAA TTGGCCGACA AGCTCGACGC CGCGATCGCA
GCGGTGTTGG CCAAGGGCCT GCGCACCGCC GACATCAAGT CGGAAGGCTC AACGGTGATC
TCGACCTCGC AGATGGGCGA AGCGATCCTG AAAGAAATGC AGGCGCTGCA CGCCTAA
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| Protein sequence | MTHLEELTMA THKLLLLPGD GIGTEVMAEV KRLIDWLNAQ GIAHFETEDG LVGGAAYDAD
KVAITDATMA KAQASDAVIF GAVGGAKWDG VPYEARPEAG LLRLRKDLGL FANLRPAVCY
PALADSSSLK REVVEGLDIM IVRELTGGVY FGEPKTITDL GNGQKRAIDT QVYDSYEIDR
IARVAFDLAR KRRNKVTSME KRNVMKSGVL WNEVVTRVHA EDYKDVQLEH QLADSGGMNL
VKWPKQFDVI VTDNLFGDIL SDIAAMLTGS LGMLPSASLG AVDANTGKRK SMYEPVHGSA
PDIAGKGLAN PVAMLASFGM ALRYSLDMGE LADKLDAAIA AVLAKGLRTA DIKSEGSTVI
STSQMGEAIL KEMQALHA
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