Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0233 |
Symbol | |
ID | 3971143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 247696 |
End bp | 248574 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923346 |
Product | Citryl-CoA lyase |
Protein accession | YP_530127 |
Protein GI | 90421757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.020258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTC CGCGCCGCAG CCTGCTGTTC ATGCCGGGGT CGAACGCCCG CGCGCTGGAA AAGGCCCGGC TGCTGCATGC CGACGGCCTC ATCCTCGACC TCGAGGATTC GGTGGCGCCG GACGCCAAGG CCACCGCGCG GGCGCAGATC GCCAAGGCGG TTGGCGACAA GGGTTTTGGC AAGCGCGAGG TGCTGATCCG GATCAACAGT CTGGACTCGC CGTGGTGGAT CGACGACCTC AATATGGCCG GCAAGGCCAA ACCGGACGGC ATCCTGGTGC CGAAGGTTTC CAGCGTCGCC GAGCTCAGCG CGATCGCCGA CCGGCTGACC GACGTCGGCG CCGAGATCGC CATCAAGGTC TGGATCATGA TCGAGACCGC GCGCGGCGTG CTGCACGCCG AGGAACTGGC GGCGGCATCG CAGGACTCCG AGATGCGGCT GGCCGGCTTC GTGTTCGGGC CGAACGATAT TTCGCGCGAA ACCGGCATTC GCATGCTGCC CGGCCGTTCG GCGATGGTGC CGATGATGAC GCATTGCGTG CTGGCGGCGC GCAGCCACGG CTTGGCGATC CTCGACGGCC CTTACAGCGA CATCGGCAAT ATCGAAGGCT TTGCGCATGA ATGCGCGCAG GCGCGCGATC TCGGCTTCGA CGGCAAGACG CTGATCCATC CCGGCCAGAT CGACGCCTGC AACGCCGCCT TCACGCCGCC GGCCGAGGAC GTCGCCTACG CCCGCAAGGT GATCGCGGCG TTTGCTGAGC CCGAAAACGC CGCGCGCGGC GCGATCCAGC TCGACGGCCG CATGGTGGAA CGGCTGCATG TCGACATGGC GAAAAAGACC ATCGCGATCG CCGACGCGAT CGCGGCGATG GGATCATGA
|
Protein sequence | MIRPRRSLLF MPGSNARALE KARLLHADGL ILDLEDSVAP DAKATARAQI AKAVGDKGFG KREVLIRINS LDSPWWIDDL NMAGKAKPDG ILVPKVSSVA ELSAIADRLT DVGAEIAIKV WIMIETARGV LHAEELAAAS QDSEMRLAGF VFGPNDISRE TGIRMLPGRS AMVPMMTHCV LAARSHGLAI LDGPYSDIGN IEGFAHECAQ ARDLGFDGKT LIHPGQIDAC NAAFTPPAED VAYARKVIAA FAEPENAARG AIQLDGRMVE RLHVDMAKKT IAIADAIAAM GS
|
| |