Gene RPC_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0233 
Symbol 
ID3971143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp247696 
End bp248574 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID637923346 
ProductCitryl-CoA lyase 
Protein accessionYP_530127 
Protein GI90421757 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.020258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC CGCGCCGCAG CCTGCTGTTC ATGCCGGGGT CGAACGCCCG CGCGCTGGAA 
AAGGCCCGGC TGCTGCATGC CGACGGCCTC ATCCTCGACC TCGAGGATTC GGTGGCGCCG
GACGCCAAGG CCACCGCGCG GGCGCAGATC GCCAAGGCGG TTGGCGACAA GGGTTTTGGC
AAGCGCGAGG TGCTGATCCG GATCAACAGT CTGGACTCGC CGTGGTGGAT CGACGACCTC
AATATGGCCG GCAAGGCCAA ACCGGACGGC ATCCTGGTGC CGAAGGTTTC CAGCGTCGCC
GAGCTCAGCG CGATCGCCGA CCGGCTGACC GACGTCGGCG CCGAGATCGC CATCAAGGTC
TGGATCATGA TCGAGACCGC GCGCGGCGTG CTGCACGCCG AGGAACTGGC GGCGGCATCG
CAGGACTCCG AGATGCGGCT GGCCGGCTTC GTGTTCGGGC CGAACGATAT TTCGCGCGAA
ACCGGCATTC GCATGCTGCC CGGCCGTTCG GCGATGGTGC CGATGATGAC GCATTGCGTG
CTGGCGGCGC GCAGCCACGG CTTGGCGATC CTCGACGGCC CTTACAGCGA CATCGGCAAT
ATCGAAGGCT TTGCGCATGA ATGCGCGCAG GCGCGCGATC TCGGCTTCGA CGGCAAGACG
CTGATCCATC CCGGCCAGAT CGACGCCTGC AACGCCGCCT TCACGCCGCC GGCCGAGGAC
GTCGCCTACG CCCGCAAGGT GATCGCGGCG TTTGCTGAGC CCGAAAACGC CGCGCGCGGC
GCGATCCAGC TCGACGGCCG CATGGTGGAA CGGCTGCATG TCGACATGGC GAAAAAGACC
ATCGCGATCG CCGACGCGAT CGCGGCGATG GGATCATGA
 
Protein sequence
MIRPRRSLLF MPGSNARALE KARLLHADGL ILDLEDSVAP DAKATARAQI AKAVGDKGFG 
KREVLIRINS LDSPWWIDDL NMAGKAKPDG ILVPKVSSVA ELSAIADRLT DVGAEIAIKV
WIMIETARGV LHAEELAAAS QDSEMRLAGF VFGPNDISRE TGIRMLPGRS AMVPMMTHCV
LAARSHGLAI LDGPYSDIGN IEGFAHECAQ ARDLGFDGKT LIHPGQIDAC NAAFTPPAED
VAYARKVIAA FAEPENAARG AIQLDGRMVE RLHVDMAKKT IAIADAIAAM GS